Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACJQW4_RS02155 | Genome accession | NZ_CP178606 |
| Coordinates | 467093..468130 (+) | Length | 345 a.a. |
| NCBI ID | WP_100242154.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. A7.4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 462093..473130
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJQW4_RS02140 (ACJQW4_02140) | - | 463405..464430 (+) | 1026 | WP_241626925.1 | class I SAM-dependent methyltransferase | - |
| ACJQW4_RS02145 (ACJQW4_02145) | - | 464440..465903 (+) | 1464 | WP_241626923.1 | amino acid permease | - |
| ACJQW4_RS02150 (ACJQW4_02150) | - | 466283..466969 (-) | 687 | WP_241626921.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACJQW4_RS02155 (ACJQW4_02155) | pilT | 467093..468130 (+) | 1038 | WP_100242154.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACJQW4_RS02160 (ACJQW4_02160) | pilU | 468160..469278 (+) | 1119 | WP_241626919.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACJQW4_RS02165 (ACJQW4_02165) | omp38 | 469419..470438 (-) | 1020 | WP_241626917.1 | outer membrane protein Omp38 | - |
| ACJQW4_RS02170 (ACJQW4_02170) | - | 470815..471333 (+) | 519 | WP_241626916.1 | GspH/FimT family pseudopilin | - |
| ACJQW4_RS02175 (ACJQW4_02175) | - | 471435..472610 (+) | 1176 | WP_241626914.1 | thiolase family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38313.94 Da Isoelectric Point: 6.6653
>NTDB_id=1090383 ACJQW4_RS02155 WP_100242154.1 467093..468130(+) (pilT) [Acinetobacter sp. A7.4]
MDITELLAFSAKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKEVHKLVYDIMNDKQRRDYEEQLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMDDLGLGNIFKEICDYPRGIVLVTGPTGSGKSTTLAAMLDYINDRRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANYGMTTLDQSL
KTLVSKGVISPQTARTVAKQPESFL
MDITELLAFSAKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKEVHKLVYDIMNDKQRRDYEEQLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMDDLGLGNIFKEICDYPRGIVLVTGPTGSGKSTTLAAMLDYINDRRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANYGMTTLDQSL
KTLVSKGVISPQTARTVAKQPESFL
Nucleotide
Download Length: 1038 bp
>NTDB_id=1090383 ACJQW4_RS02155 WP_100242154.1 467093..468130(+) (pilT) [Acinetobacter sp. A7.4]
ATGGATATTACAGAATTATTGGCTTTTTCGGCAAAAAACGGGGCTTCCGACTTACACTTATCTGCGGGTATGCCTCCAAT
GATTCGCGTAGACGGTGAAGTAAGACGTATCAACCTACCTGCATTAGAACATAAAGAAGTACACAAACTGGTGTACGACA
TTATGAATGACAAACAGCGTCGCGATTATGAAGAACAACTGGAAACCGACTTCTCTTTTGAAGTTCCTGGGGTTGCCCGT
TTCCGTGTCAACGCATTTAACCAGAACCGCGGTGCAGGTGCTGTATTCCGTACCATTCCATCTAAAGTTTTGACCATGGA
CGACCTTGGTCTGGGCAATATTTTTAAAGAGATCTGTGATTACCCTCGTGGCATCGTATTGGTCACAGGACCAACGGGTT
CTGGTAAATCAACAACCCTAGCCGCAATGCTGGACTACATTAATGATCGACGTTATGACCATATTTTAACGGTCGAAGAT
CCAATCGAATTTGTACACCAATCCAAAAAATGTCTGATTAACCAGCGTGAAGTACACCGTGATACTCATGGCTTCAACGA
AGCACTCCGCTCAGCATTACGTGAAGACCCTGACATTATTCTAGTCGGTGAGATGCGTGACCTTGAAACCATTCGTCTGG
CTTTAACTGCTGCTGAAACGGGTCACTTGGTTTTCGGTACACTGCATACTACCTCCGCAGCGAAAACCATTGACCGTGTC
ATTGACGTATTCCCTGCCGAAGAAAAAGATATGGTTCGCGCGATGCTCTCAGAATCACTACAGGCCGTCATTTCACAAAC
ACTCTTAAAGAAAAATGGTGGAGGTCGTGTGGCAGCCCATGAAATCATGATTGGTATTCCAGCGATTCGTAACTTAATTC
GTGAAAACAAAGTTGCACAAATGTACTCTGCCATTCAAACAGGTGCCAACTATGGTATGACCACCCTAGATCAGAGCCTT
AAAACTCTAGTATCGAAAGGTGTGATTAGTCCTCAAACAGCACGTACTGTTGCCAAACAACCAGAATCATTCTTATAA
ATGGATATTACAGAATTATTGGCTTTTTCGGCAAAAAACGGGGCTTCCGACTTACACTTATCTGCGGGTATGCCTCCAAT
GATTCGCGTAGACGGTGAAGTAAGACGTATCAACCTACCTGCATTAGAACATAAAGAAGTACACAAACTGGTGTACGACA
TTATGAATGACAAACAGCGTCGCGATTATGAAGAACAACTGGAAACCGACTTCTCTTTTGAAGTTCCTGGGGTTGCCCGT
TTCCGTGTCAACGCATTTAACCAGAACCGCGGTGCAGGTGCTGTATTCCGTACCATTCCATCTAAAGTTTTGACCATGGA
CGACCTTGGTCTGGGCAATATTTTTAAAGAGATCTGTGATTACCCTCGTGGCATCGTATTGGTCACAGGACCAACGGGTT
CTGGTAAATCAACAACCCTAGCCGCAATGCTGGACTACATTAATGATCGACGTTATGACCATATTTTAACGGTCGAAGAT
CCAATCGAATTTGTACACCAATCCAAAAAATGTCTGATTAACCAGCGTGAAGTACACCGTGATACTCATGGCTTCAACGA
AGCACTCCGCTCAGCATTACGTGAAGACCCTGACATTATTCTAGTCGGTGAGATGCGTGACCTTGAAACCATTCGTCTGG
CTTTAACTGCTGCTGAAACGGGTCACTTGGTTTTCGGTACACTGCATACTACCTCCGCAGCGAAAACCATTGACCGTGTC
ATTGACGTATTCCCTGCCGAAGAAAAAGATATGGTTCGCGCGATGCTCTCAGAATCACTACAGGCCGTCATTTCACAAAC
ACTCTTAAAGAAAAATGGTGGAGGTCGTGTGGCAGCCCATGAAATCATGATTGGTATTCCAGCGATTCGTAACTTAATTC
GTGAAAACAAAGTTGCACAAATGTACTCTGCCATTCAAACAGGTGCCAACTATGGTATGACCACCCTAGATCAGAGCCTT
AAAACTCTAGTATCGAAAGGTGTGATTAGTCCTCAAACAGCACGTACTGTTGCCAAACAACCAGAATCATTCTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
95.942 |
100 |
0.959 |
| pilT | Acinetobacter baumannii D1279779 |
95.652 |
100 |
0.957 |
| pilT | Acinetobacter baumannii strain A118 |
95.652 |
100 |
0.957 |
| pilT | Acinetobacter baylyi ADP1 |
87.791 |
99.71 |
0.875 |
| pilT | Pseudomonas aeruginosa PAK |
84.302 |
99.71 |
0.841 |
| pilT | Pseudomonas stutzeri DSM 10701 |
84.012 |
99.71 |
0.838 |
| pilT | Legionella pneumophila strain Lp02 |
75 |
99.71 |
0.748 |
| pilT | Legionella pneumophila strain ERS1305867 |
75 |
99.71 |
0.748 |
| pilT | Neisseria meningitidis 8013 |
67.826 |
100 |
0.678 |
| pilT | Neisseria gonorrhoeae MS11 |
67.536 |
100 |
0.675 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
69.048 |
97.391 |
0.672 |
| pilT | Vibrio cholerae strain A1552 |
69.048 |
97.391 |
0.672 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.014 |
100 |
0.51 |
| pilU | Vibrio cholerae strain A1552 |
41.194 |
97.101 |
0.4 |
| pilU | Acinetobacter baylyi ADP1 |
39.595 |
100 |
0.397 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40 |
97.101 |
0.388 |