Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACJ7VY_RS04305 | Genome accession | NZ_CP176501 |
| Coordinates | 964648..965685 (+) | Length | 345 a.a. |
| NCBI ID | WP_104938226.1 | Uniprot ID | - |
| Organism | Stenotrophomonas sp. Y-13 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 959648..970685
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ7VY_RS04290 (ACJ7VY_04290) | - | 960435..961493 (+) | 1059 | WP_409476429.1 | DUF4105 domain-containing protein | - |
| ACJ7VY_RS04295 (ACJ7VY_04295) | - | 961490..963445 (+) | 1956 | WP_104938224.1 | esterase/lipase family protein | - |
| ACJ7VY_RS04300 (ACJ7VY_04300) | proC | 963541..964380 (-) | 840 | WP_409476430.1 | pyrroline-5-carboxylate reductase | - |
| ACJ7VY_RS04305 (ACJ7VY_04305) | pilT | 964648..965685 (+) | 1038 | WP_104938226.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACJ7VY_RS04310 (ACJ7VY_04310) | pilU | 965821..966951 (+) | 1131 | WP_104938227.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACJ7VY_RS04315 (ACJ7VY_04315) | - | 967462..968100 (+) | 639 | WP_240211687.1 | DUF3617 domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38581.23 Da Isoelectric Point: 6.7271
>NTDB_id=1080470 ACJ7VY_RS04305 WP_104938226.1 964648..965685(+) (pilT) [Stenotrophomonas sp. Y-13]
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDYEEFLEVDFSFEIPSLAR
FRVNAFNQNRGAGAVFRTIPSEVLTLEDLACPPVFRQLIEQPQGLILVTGPTGSGKSTTLAAMVDHINKNEYGHILTVED
PIEFVHTPQKCLINQREVHRDTHGFNEALRSALREDPDYILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRIASHEIMVATPAIRNLIREDKVAQMYSAIQTGQQAGMQTLDQNL
QDLVKRSLITRNQAREYAKDRRLFE
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDYEEFLEVDFSFEIPSLAR
FRVNAFNQNRGAGAVFRTIPSEVLTLEDLACPPVFRQLIEQPQGLILVTGPTGSGKSTTLAAMVDHINKNEYGHILTVED
PIEFVHTPQKCLINQREVHRDTHGFNEALRSALREDPDYILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRIASHEIMVATPAIRNLIREDKVAQMYSAIQTGQQAGMQTLDQNL
QDLVKRSLITRNQAREYAKDRRLFE
Nucleotide
Download Length: 1038 bp
>NTDB_id=1080470 ACJ7VY_RS04305 WP_104938226.1 964648..965685(+) (pilT) [Stenotrophomonas sp. Y-13]
ATGGACATCGCTGAACTTCTGGCGTTCTCGGTCAAGAACAAGGCCTCGGACCTGCACCTGTCCGCCGGCCTGCCACCGAT
GATCCGCGTCGACGGCGACGTGCGCCGCATCAACATCCCGGCACTGGACCACAAGCAGGTCCACGCGCTGGTGTACGACA
TCATGTCGGACAAGCAGCGCCGCGACTACGAGGAGTTCCTCGAGGTCGACTTCTCCTTCGAGATTCCCTCGCTGGCACGC
TTCCGCGTCAACGCGTTCAACCAGAACCGCGGTGCCGGCGCGGTGTTCCGTACCATTCCCTCGGAAGTGCTGACCCTGGA
AGACCTGGCGTGCCCGCCGGTGTTCCGGCAGCTGATCGAGCAGCCGCAGGGGCTGATCCTGGTTACCGGCCCGACCGGTT
CGGGCAAGTCGACCACGCTGGCGGCGATGGTGGACCACATCAACAAGAACGAGTACGGCCACATCCTCACCGTCGAGGAT
CCGATCGAATTCGTGCACACCCCGCAGAAGTGCCTGATCAACCAGCGCGAAGTGCACCGCGACACCCACGGCTTCAACGA
GGCGCTGCGTTCGGCGCTGCGCGAGGACCCGGACTACATCCTGGTGGGCGAACTGCGTGACCTGGAAACCATCCGCCTGG
CGCTGACCGCCGCGGAGACCGGCCACCTGGTGTTCGGTACCCTGCATACCAGTTCGGCGGCCAAGACCATCGACCGCATC
ATCGACGTGTTCCCGGCCGGCGAGAAGCCGATGGTGCGCTCGATGCTGTCCGAATCGCTGCGCGCGGTGATCTCGCAGGC
GCTGCTGAAGAAGGTCGGCGGCGGCCGCATCGCCTCGCACGAGATCATGGTGGCCACCCCGGCGATCCGCAACCTGATCC
GCGAGGACAAGGTCGCGCAGATGTACTCGGCCATCCAGACCGGCCAGCAGGCGGGCATGCAGACCCTCGACCAGAACCTG
CAGGACCTGGTCAAGCGCAGCCTGATCACCCGCAACCAGGCCCGTGAATACGCCAAGGACCGGCGCCTGTTCGAATAA
ATGGACATCGCTGAACTTCTGGCGTTCTCGGTCAAGAACAAGGCCTCGGACCTGCACCTGTCCGCCGGCCTGCCACCGAT
GATCCGCGTCGACGGCGACGTGCGCCGCATCAACATCCCGGCACTGGACCACAAGCAGGTCCACGCGCTGGTGTACGACA
TCATGTCGGACAAGCAGCGCCGCGACTACGAGGAGTTCCTCGAGGTCGACTTCTCCTTCGAGATTCCCTCGCTGGCACGC
TTCCGCGTCAACGCGTTCAACCAGAACCGCGGTGCCGGCGCGGTGTTCCGTACCATTCCCTCGGAAGTGCTGACCCTGGA
AGACCTGGCGTGCCCGCCGGTGTTCCGGCAGCTGATCGAGCAGCCGCAGGGGCTGATCCTGGTTACCGGCCCGACCGGTT
CGGGCAAGTCGACCACGCTGGCGGCGATGGTGGACCACATCAACAAGAACGAGTACGGCCACATCCTCACCGTCGAGGAT
CCGATCGAATTCGTGCACACCCCGCAGAAGTGCCTGATCAACCAGCGCGAAGTGCACCGCGACACCCACGGCTTCAACGA
GGCGCTGCGTTCGGCGCTGCGCGAGGACCCGGACTACATCCTGGTGGGCGAACTGCGTGACCTGGAAACCATCCGCCTGG
CGCTGACCGCCGCGGAGACCGGCCACCTGGTGTTCGGTACCCTGCATACCAGTTCGGCGGCCAAGACCATCGACCGCATC
ATCGACGTGTTCCCGGCCGGCGAGAAGCCGATGGTGCGCTCGATGCTGTCCGAATCGCTGCGCGCGGTGATCTCGCAGGC
GCTGCTGAAGAAGGTCGGCGGCGGCCGCATCGCCTCGCACGAGATCATGGTGGCCACCCCGGCGATCCGCAACCTGATCC
GCGAGGACAAGGTCGCGCAGATGTACTCGGCCATCCAGACCGGCCAGCAGGCGGGCATGCAGACCCTCGACCAGAACCTG
CAGGACCTGGTCAAGCGCAGCCTGATCACCCGCAACCAGGCCCGTGAATACGCCAAGGACCGGCGCCTGTTCGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
78.488 |
99.71 |
0.783 |
| pilT | Acinetobacter baumannii D1279779 |
78.488 |
99.71 |
0.783 |
| pilT | Acinetobacter baumannii strain A118 |
78.488 |
99.71 |
0.783 |
| pilT | Pseudomonas stutzeri DSM 10701 |
78.761 |
98.261 |
0.774 |
| pilT | Acinetobacter baylyi ADP1 |
77.326 |
99.71 |
0.771 |
| pilT | Pseudomonas aeruginosa PAK |
78.171 |
98.261 |
0.768 |
| pilT | Legionella pneumophila strain Lp02 |
72.965 |
99.71 |
0.728 |
| pilT | Legionella pneumophila strain ERS1305867 |
72.965 |
99.71 |
0.728 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
72.036 |
95.362 |
0.687 |
| pilT | Vibrio cholerae strain A1552 |
72.036 |
95.362 |
0.687 |
| pilT | Neisseria meningitidis 8013 |
66.276 |
98.841 |
0.655 |
| pilT | Neisseria gonorrhoeae MS11 |
65.982 |
98.841 |
0.652 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.565 |
100 |
0.496 |
| pilU | Vibrio cholerae strain A1552 |
40.517 |
100 |
0.409 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.708 |
98.261 |
0.4 |
| pilU | Acinetobacter baylyi ADP1 |
39.706 |
98.551 |
0.391 |