Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACHP5M_RS18185 | Genome accession | NZ_CP172163 |
| Coordinates | 3756272..3757252 (-) | Length | 326 a.a. |
| NCBI ID | WP_072017183.1 | Uniprot ID | - |
| Organism | Escherichia coli strain GF50 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3751272..3762252
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACHP5M_RS18155 (ACHP5M_18155) | yggI | 3751996..3752493 (+) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
| ACHP5M_RS18160 (ACHP5M_18160) | endA | 3752588..3753295 (+) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| ACHP5M_RS18165 (ACHP5M_18165) | rsmE | 3753375..3754106 (+) | 732 | WP_001222508.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| ACHP5M_RS18170 (ACHP5M_18170) | gshB | 3754119..3755069 (+) | 951 | WP_000593273.1 | glutathione synthase | - |
| ACHP5M_RS18175 (ACHP5M_18175) | yqgE | 3755178..3755741 (+) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| ACHP5M_RS18180 (ACHP5M_18180) | ruvX | 3755741..3756157 (+) | 417 | WP_000017111.1 | Holliday junction resolvase RuvX | - |
| ACHP5M_RS18185 (ACHP5M_18185) | pilT | 3756272..3757252 (-) | 981 | WP_072017183.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACHP5M_RS18190 (ACHP5M_18190) | yggS | 3757270..3757974 (+) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| ACHP5M_RS18195 (ACHP5M_18195) | yggT | 3757992..3758558 (+) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| ACHP5M_RS18200 (ACHP5M_18200) | yggU | 3758555..3758845 (+) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| ACHP5M_RS18205 (ACHP5M_18205) | rdgB | 3758853..3759446 (+) | 594 | WP_001174751.1 | XTP/dITP diphosphatase | - |
| ACHP5M_RS18210 (ACHP5M_18210) | hemW | 3759439..3760575 (+) | 1137 | WP_000239939.1 | radical SAM family heme chaperone HemW | - |
| ACHP5M_RS18215 (ACHP5M_18215) | - | 3760888..3761874 (+) | 987 | WP_000784004.1 | TRAP transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35908.10 Da Isoelectric Point: 5.7654
>NTDB_id=1065552 ACHP5M_RS18185 WP_072017183.1 3756272..3757252(-) (pilT) [Escherichia coli strain GF50]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQHR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQHR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=1065552 ACHP5M_RS18185 WP_072017183.1 3756272..3757252(-) (pilT) [Escherichia coli strain GF50]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAATGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTTAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCGACATTACACACGCGCGGCGCAGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCAGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTGCTGATTAACACACCAGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGAATGTTAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAATGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTTAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCGACATTACACACGCGCGGCGCAGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCAGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTGCTGATTAACACACCAGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGAATGTTAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.