Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACGK9W_RS19875 | Genome accession | NZ_CP171359 |
| Coordinates | 4263050..4264084 (+) | Length | 344 a.a. |
| NCBI ID | WP_008174189.1 | Uniprot ID | A0A352INV9 |
| Organism | Marinobacter flavimaris strain ZYH30 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4258050..4269084
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACGK9W_RS19855 (ACGK9W_19855) | - | 4258495..4260459 (-) | 1965 | WP_008174181.1 | dynamin family protein | - |
| ACGK9W_RS19860 (ACGK9W_19860) | - | 4260703..4261287 (-) | 585 | WP_008174183.1 | YggT family protein | - |
| ACGK9W_RS19865 (ACGK9W_19865) | proC | 4261310..4262143 (-) | 834 | WP_014575886.1 | pyrroline-5-carboxylate reductase | - |
| ACGK9W_RS19870 (ACGK9W_19870) | - | 4262205..4262909 (-) | 705 | WP_405418340.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACGK9W_RS19875 (ACGK9W_19875) | pilT | 4263050..4264084 (+) | 1035 | WP_008174189.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACGK9W_RS19880 (ACGK9W_19880) | pilU | 4264143..4265264 (+) | 1122 | WP_405418343.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACGK9W_RS19885 (ACGK9W_19885) | - | 4265504..4266850 (+) | 1347 | WP_405418346.1 | OmpP1/FadL family transporter | - |
| ACGK9W_RS19890 (ACGK9W_19890) | - | 4266871..4267245 (-) | 375 | WP_273046231.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38100.79 Da Isoelectric Point: 6.2443
>NTDB_id=1060875 ACGK9W_RS19875 WP_008174189.1 4263050..4264084(+) (pilT) [Marinobacter flavimaris strain ZYH30]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDVSSVPRGLVLVTGPTGSGKSTTLAAMIDYINDTRYEHVLTIED
PIEFVHDSKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDVSSVPRGLVLVTGPTGSGKSTTLAAMIDYINDTRYEHVLTIED
PIEFVHDSKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
Nucleotide
Download Length: 1035 bp
>NTDB_id=1060875 ACGK9W_RS19875 WP_008174189.1 4263050..4264084(+) (pilT) [Marinobacter flavimaris strain ZYH30]
ATGGATATTACTGAACTGCTTGCCTTTTCGGCGAAACAGGGTGCGTCTGACTTGCACCTCTCTGCCGGTTTGCCCCCGAT
GATTCGTGTTGATGGTGATGTACGCCGCATCAACCTGCCGCCCATGGAGCACAAAGAAGTCCACGGGCTCATCTACGACA
TCATGAATGACAAGCAGCGTAAGGACTACGAGGAATTCCTGGAAACCGACTTCTCCTTCGAAGTTCCGGGCGTCGCCCGT
TTCCGTGTTAACGCTTTTAACCAGAACCGTGGCGCAGGCGCCGTGTTCCGGACCATCCCTTCCAAAGTACTGACCATGGA
AGATCTGGGTATGGGGCAGGTGTTCAAGGACGTGTCTTCAGTGCCTCGTGGTCTGGTACTGGTGACCGGCCCGACGGGCT
CGGGTAAGTCCACCACGCTGGCGGCGATGATCGATTACATCAACGACACCCGCTACGAACACGTTCTTACCATTGAAGAC
CCCATCGAATTCGTACACGACTCAAAGAAATGCCTGGTGAACCAGCGGGAAGTGCACCGGGATACTCTGGGCTTCAACGA
AGCACTGCGCTCGGCCCTGCGGGAAGACCCCGACATCATCCTGGTTGGTGAGCTCCGGGATCTGGAAACCATCCGCCTGG
CGCTGACAGCGGCTGAGACCGGCCACCTTGTATTCGGCACCCTGCACACCACCTCTGCCGCCAAGACCATTGACCGTGTG
GTCGACGTGTTCCCGGCGGAGGAAAAGTCCATGGTGCGGTCGATGCTGTCAGAATCCCTGCAGGCAGTTATATCCCAGAC
CCTGATGAAGAAAATGGGCGGCGGCCGGATTGCGGCGCACGAGATCATGATCGGTACGTCTGCGATCCGGAACCTGATCC
GGGAAGACAAGATCGCGCAGATGTATTCGTCGATCCAGACCGGCGGTTCACTGGGCATGCAGACGTTGGACCAGTGCCTG
GAGCGGCTGCTGCAGAAAGGGCTTATTTCCCGTGAAGCGGCGCGGGCCAAGGCCAAGATGCCCGATAATTTTTAA
ATGGATATTACTGAACTGCTTGCCTTTTCGGCGAAACAGGGTGCGTCTGACTTGCACCTCTCTGCCGGTTTGCCCCCGAT
GATTCGTGTTGATGGTGATGTACGCCGCATCAACCTGCCGCCCATGGAGCACAAAGAAGTCCACGGGCTCATCTACGACA
TCATGAATGACAAGCAGCGTAAGGACTACGAGGAATTCCTGGAAACCGACTTCTCCTTCGAAGTTCCGGGCGTCGCCCGT
TTCCGTGTTAACGCTTTTAACCAGAACCGTGGCGCAGGCGCCGTGTTCCGGACCATCCCTTCCAAAGTACTGACCATGGA
AGATCTGGGTATGGGGCAGGTGTTCAAGGACGTGTCTTCAGTGCCTCGTGGTCTGGTACTGGTGACCGGCCCGACGGGCT
CGGGTAAGTCCACCACGCTGGCGGCGATGATCGATTACATCAACGACACCCGCTACGAACACGTTCTTACCATTGAAGAC
CCCATCGAATTCGTACACGACTCAAAGAAATGCCTGGTGAACCAGCGGGAAGTGCACCGGGATACTCTGGGCTTCAACGA
AGCACTGCGCTCGGCCCTGCGGGAAGACCCCGACATCATCCTGGTTGGTGAGCTCCGGGATCTGGAAACCATCCGCCTGG
CGCTGACAGCGGCTGAGACCGGCCACCTTGTATTCGGCACCCTGCACACCACCTCTGCCGCCAAGACCATTGACCGTGTG
GTCGACGTGTTCCCGGCGGAGGAAAAGTCCATGGTGCGGTCGATGCTGTCAGAATCCCTGCAGGCAGTTATATCCCAGAC
CCTGATGAAGAAAATGGGCGGCGGCCGGATTGCGGCGCACGAGATCATGATCGGTACGTCTGCGATCCGGAACCTGATCC
GGGAAGACAAGATCGCGCAGATGTATTCGTCGATCCAGACCGGCGGTTCACTGGGCATGCAGACGTTGGACCAGTGCCTG
GAGCGGCTGCTGCAGAAAGGGCTTATTTCCCGTGAAGCGGCGCGGGCCAAGGCCAAGATGCCCGATAATTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
90.116 |
100 |
0.901 |
| pilT | Pseudomonas stutzeri DSM 10701 |
89.535 |
100 |
0.895 |
| pilT | Acinetobacter nosocomialis M2 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baumannii D1279779 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baumannii strain A118 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baylyi ADP1 |
81.395 |
100 |
0.814 |
| pilT | Legionella pneumophila strain Lp02 |
77.219 |
98.256 |
0.759 |
| pilT | Legionella pneumophila strain ERS1305867 |
77.219 |
98.256 |
0.759 |
| pilT | Neisseria gonorrhoeae MS11 |
67.941 |
98.837 |
0.672 |
| pilT | Neisseria meningitidis 8013 |
67.941 |
98.837 |
0.672 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
65.882 |
98.837 |
0.651 |
| pilT | Vibrio cholerae strain A1552 |
65.882 |
98.837 |
0.651 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.014 |
100 |
0.512 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.194 |
97.384 |
0.401 |
| pilU | Acinetobacter baylyi ADP1 |
39.017 |
100 |
0.392 |
| pilU | Vibrio cholerae strain A1552 |
39.403 |
97.384 |
0.384 |