Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACFJIX_RS11210 | Genome accession | NZ_CP170545 |
| Coordinates | 2421871..2422914 (-) | Length | 347 a.a. |
| NCBI ID | WP_377159998.1 | Uniprot ID | - |
| Organism | Roseateles sp. UC29_93 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2416871..2427914
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFJIX_RS11195 (ACFJIX_11195) | - | 2418165..2419583 (+) | 1419 | WP_377159994.1 | efflux transporter outer membrane subunit | - |
| ACFJIX_RS11200 (ACFJIX_11200) | - | 2419680..2420582 (-) | 903 | WP_377159996.1 | NAD(P)-dependent oxidoreductase | - |
| ACFJIX_RS11205 (ACFJIX_11205) | pilU | 2420649..2421785 (-) | 1137 | WP_088407837.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACFJIX_RS11210 (ACFJIX_11210) | pilT | 2421871..2422914 (-) | 1044 | WP_377159998.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACFJIX_RS11215 (ACFJIX_11215) | - | 2422940..2423671 (+) | 732 | WP_377160000.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACFJIX_RS11220 (ACFJIX_11220) | - | 2424689..2425209 (+) | 521 | Protein_2209 | GGDEF domain-containing protein | - |
| ACFJIX_RS11225 (ACFJIX_11225) | - | 2425530..2427089 (+) | 1560 | WP_377160002.1 | methyl-accepting chemotaxis protein | - |
| ACFJIX_RS11230 (ACFJIX_11230) | - | 2427146..2427484 (+) | 339 | WP_331613150.1 | energy transducer TonB | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38346.01 Da Isoelectric Point: 7.0600
>NTDB_id=1057882 ACFJIX_RS11210 WP_377159998.1 2421871..2422914(-) (pilT) [Roseateles sp. UC29_93]
MDITQLLAFSVKNKASDLHLSAGLPPMIRVHGDVRRINVEALEHRQVHDMVYDIMSDAQRKAYEETLEVDFSFEIQGLAR
FRVNAFNHNRGAGAVFRTIPSKILTLEQLNCPKVFTELAMKPRGMVLVTGPTGSGKSTTLAAMVNHLNENEYGHILTVED
PIEFVHESKKCLVNQREVGPQTLSFSNALRSALREDPDCILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRI
VDVFPAAEKDMVRAMLSESLQAVISQTLCKTKDGNGRVAAHEIMLGTSAIRNLIRENKVAQMYSSIQTGNNLGMQTLDQN
LTDLVRRNIISPAEARAKAKMPENFPG
MDITQLLAFSVKNKASDLHLSAGLPPMIRVHGDVRRINVEALEHRQVHDMVYDIMSDAQRKAYEETLEVDFSFEIQGLAR
FRVNAFNHNRGAGAVFRTIPSKILTLEQLNCPKVFTELAMKPRGMVLVTGPTGSGKSTTLAAMVNHLNENEYGHILTVED
PIEFVHESKKCLVNQREVGPQTLSFSNALRSALREDPDCILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRI
VDVFPAAEKDMVRAMLSESLQAVISQTLCKTKDGNGRVAAHEIMLGTSAIRNLIRENKVAQMYSSIQTGNNLGMQTLDQN
LTDLVRRNIISPAEARAKAKMPENFPG
Nucleotide
Download Length: 1044 bp
>NTDB_id=1057882 ACFJIX_RS11210 WP_377159998.1 2421871..2422914(-) (pilT) [Roseateles sp. UC29_93]
ATGGACATCACCCAACTGCTGGCATTCTCGGTCAAGAACAAGGCCTCCGACCTTCACTTGTCCGCCGGGCTGCCCCCCAT
GATCCGCGTCCATGGCGACGTGCGCCGCATCAACGTCGAAGCGCTCGAGCACCGACAGGTGCACGACATGGTCTACGACA
TCATGAGCGACGCCCAGCGCAAGGCCTACGAGGAGACGCTGGAAGTCGACTTCTCGTTCGAGATCCAGGGCCTGGCGCGC
TTCCGCGTCAACGCGTTCAACCACAACCGCGGCGCCGGGGCGGTGTTCCGGACGATTCCGAGCAAGATCCTGACGCTCGA
GCAGCTGAACTGCCCGAAGGTGTTCACCGAGCTGGCGATGAAGCCCCGCGGCATGGTGCTGGTGACGGGACCGACCGGTT
CAGGCAAGAGCACGACGCTGGCCGCGATGGTCAACCACCTCAACGAGAACGAGTACGGCCACATCCTGACCGTCGAGGAC
CCGATCGAATTCGTCCACGAATCCAAGAAGTGCCTGGTCAACCAGCGCGAGGTGGGTCCGCAGACGCTGAGCTTCTCCAA
CGCGCTGCGCTCGGCGCTGCGCGAGGACCCGGACTGCATCCTGGTCGGCGAAATGCGCGACCTGGAAACCATCCGCCTGG
CGCTGACCGCCGCGGAAACGGGCCACCTGGTCTTCGGCACGCTGCACACGTCGTCGGCCGCCAAGACGGTGGACCGGATC
GTCGACGTCTTCCCCGCCGCCGAGAAGGACATGGTCCGCGCCATGCTGTCCGAGTCGCTGCAGGCGGTGATCTCGCAGAC
GCTGTGCAAGACCAAGGACGGCAACGGCCGGGTCGCGGCGCACGAGATCATGCTGGGCACCTCGGCGATCCGGAACCTGA
TCCGGGAGAACAAGGTCGCGCAGATGTACTCGTCGATCCAGACGGGCAACAACCTGGGCATGCAGACGCTGGACCAGAAC
CTCACCGACCTGGTCCGCCGCAACATCATCTCGCCGGCCGAGGCTCGCGCGAAGGCCAAGATGCCTGAGAACTTCCCGGG
CTGA
ATGGACATCACCCAACTGCTGGCATTCTCGGTCAAGAACAAGGCCTCCGACCTTCACTTGTCCGCCGGGCTGCCCCCCAT
GATCCGCGTCCATGGCGACGTGCGCCGCATCAACGTCGAAGCGCTCGAGCACCGACAGGTGCACGACATGGTCTACGACA
TCATGAGCGACGCCCAGCGCAAGGCCTACGAGGAGACGCTGGAAGTCGACTTCTCGTTCGAGATCCAGGGCCTGGCGCGC
TTCCGCGTCAACGCGTTCAACCACAACCGCGGCGCCGGGGCGGTGTTCCGGACGATTCCGAGCAAGATCCTGACGCTCGA
GCAGCTGAACTGCCCGAAGGTGTTCACCGAGCTGGCGATGAAGCCCCGCGGCATGGTGCTGGTGACGGGACCGACCGGTT
CAGGCAAGAGCACGACGCTGGCCGCGATGGTCAACCACCTCAACGAGAACGAGTACGGCCACATCCTGACCGTCGAGGAC
CCGATCGAATTCGTCCACGAATCCAAGAAGTGCCTGGTCAACCAGCGCGAGGTGGGTCCGCAGACGCTGAGCTTCTCCAA
CGCGCTGCGCTCGGCGCTGCGCGAGGACCCGGACTGCATCCTGGTCGGCGAAATGCGCGACCTGGAAACCATCCGCCTGG
CGCTGACCGCCGCGGAAACGGGCCACCTGGTCTTCGGCACGCTGCACACGTCGTCGGCCGCCAAGACGGTGGACCGGATC
GTCGACGTCTTCCCCGCCGCCGAGAAGGACATGGTCCGCGCCATGCTGTCCGAGTCGCTGCAGGCGGTGATCTCGCAGAC
GCTGTGCAAGACCAAGGACGGCAACGGCCGGGTCGCGGCGCACGAGATCATGCTGGGCACCTCGGCGATCCGGAACCTGA
TCCGGGAGAACAAGGTCGCGCAGATGTACTCGTCGATCCAGACGGGCAACAACCTGGGCATGCAGACGCTGGACCAGAAC
CTCACCGACCTGGTCCGCCGCAACATCATCTCGCCGGCCGAGGCTCGCGCGAAGGCCAAGATGCCTGAGAACTTCCCGGG
CTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
76.812 |
99.424 |
0.764 |
| pilT | Acinetobacter nosocomialis M2 |
76.522 |
99.424 |
0.761 |
| pilT | Acinetobacter baumannii D1279779 |
76.522 |
99.424 |
0.761 |
| pilT | Acinetobacter baumannii strain A118 |
76.522 |
99.424 |
0.761 |
| pilT | Pseudomonas stutzeri DSM 10701 |
76.232 |
99.424 |
0.758 |
| pilT | Acinetobacter baylyi ADP1 |
74.493 |
99.424 |
0.741 |
| pilT | Legionella pneumophila strain Lp02 |
71.976 |
97.695 |
0.703 |
| pilT | Legionella pneumophila strain ERS1305867 |
71.976 |
97.695 |
0.703 |
| pilT | Neisseria meningitidis 8013 |
68.406 |
99.424 |
0.68 |
| pilT | Neisseria gonorrhoeae MS11 |
68.116 |
99.424 |
0.677 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.569 |
98.271 |
0.654 |
| pilT | Vibrio cholerae strain A1552 |
66.569 |
98.271 |
0.654 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.565 |
99.424 |
0.493 |
| pilU | Vibrio cholerae strain A1552 |
42.687 |
96.542 |
0.412 |
| pilU | Acinetobacter baylyi ADP1 |
41.04 |
99.712 |
0.409 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.194 |
96.542 |
0.398 |