Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACFDAU_RS13905 | Genome accession | NZ_CP170197 |
| Coordinates | 2800833..2801876 (+) | Length | 347 a.a. |
| NCBI ID | WP_413437494.1 | Uniprot ID | - |
| Organism | Sulfuriferula sp. GW1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2795833..2806876
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFDAU_RS13880 (ACFDAU_13880) | - | 2796373..2798340 (-) | 1968 | WP_413437488.1 | dynamin family protein | - |
| ACFDAU_RS13885 (ACFDAU_13885) | - | 2798343..2798642 (-) | 300 | WP_413437490.1 | DUF167 domain-containing protein | - |
| ACFDAU_RS13890 (ACFDAU_13890) | - | 2798655..2799230 (-) | 576 | WP_413437491.1 | YggT family protein | - |
| ACFDAU_RS13895 (ACFDAU_13895) | proC | 2799293..2800099 (-) | 807 | WP_413437492.1 | pyrroline-5-carboxylate reductase | - |
| ACFDAU_RS13900 (ACFDAU_13900) | - | 2800116..2800799 (-) | 684 | WP_413437493.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACFDAU_RS13905 (ACFDAU_13905) | pilT | 2800833..2801876 (+) | 1044 | WP_413437494.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACFDAU_RS13910 (ACFDAU_13910) | pilU | 2801894..2803021 (+) | 1128 | WP_413437495.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACFDAU_RS13915 (ACFDAU_13915) | - | 2803311..2806058 (+) | 2748 | WP_413437496.1 | EAL domain-containing protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38250.75 Da Isoelectric Point: 6.8353
>NTDB_id=1055510 ACFDAU_RS13905 WP_413437494.1 2800833..2801876(+) (pilT) [Sulfuriferula sp. GW1]
MEISELLAFAVKNKASDLHLSAGLPPMIRVHGDIRRINLPALDHTTVHDMVYDIMNDGQRKTYEESLEVDFSFEVPTLAR
FRVNAFNQNRGSGAVFRTIPSKVLTLEELNAPKIFKDISDQPRGIVLVTGPTGSGKSTTLAAMVDYVNETQFGHILTVED
PIEFVHQSKKCVINQREVGPHTQSFSNALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
VDVFPAAEKEMVRSMLSESIRAVIAQTLLKTKDGAGRVAAHEIMIGTPAIRNLIRENKIAQMYSSIQTGQNVGMQTLDQC
LQDLVRRNTVSVGEARSRASNKDMFAG
MEISELLAFAVKNKASDLHLSAGLPPMIRVHGDIRRINLPALDHTTVHDMVYDIMNDGQRKTYEESLEVDFSFEVPTLAR
FRVNAFNQNRGSGAVFRTIPSKVLTLEELNAPKIFKDISDQPRGIVLVTGPTGSGKSTTLAAMVDYVNETQFGHILTVED
PIEFVHQSKKCVINQREVGPHTQSFSNALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
VDVFPAAEKEMVRSMLSESIRAVIAQTLLKTKDGAGRVAAHEIMIGTPAIRNLIRENKIAQMYSSIQTGQNVGMQTLDQC
LQDLVRRNTVSVGEARSRASNKDMFAG
Nucleotide
Download Length: 1044 bp
>NTDB_id=1055510 ACFDAU_RS13905 WP_413437494.1 2800833..2801876(+) (pilT) [Sulfuriferula sp. GW1]
ATGGAAATCTCCGAACTGCTCGCCTTTGCTGTCAAGAACAAAGCCTCCGACCTGCATCTGTCGGCCGGCCTGCCGCCGAT
GATACGGGTACACGGCGACATCCGCCGCATCAATCTGCCCGCCCTGGATCACACTACGGTGCACGACATGGTGTACGACA
TCATGAACGATGGCCAGCGCAAAACCTATGAAGAATCGCTGGAGGTGGACTTTTCCTTCGAGGTTCCCACGCTGGCGCGC
TTTCGCGTCAATGCTTTCAACCAGAACCGCGGCTCGGGTGCCGTGTTCCGTACCATTCCCAGCAAGGTGCTGACGCTGGA
AGAACTCAATGCACCCAAGATTTTCAAGGACATATCCGACCAGCCGCGCGGCATCGTGCTGGTCACCGGCCCTACCGGTT
CGGGCAAATCCACCACGCTGGCGGCGATGGTGGACTACGTCAACGAAACCCAGTTCGGCCATATCCTGACCGTCGAAGAC
CCGATTGAATTCGTCCACCAGAGCAAAAAATGCGTGATCAACCAGCGTGAAGTGGGCCCGCACACGCAAAGCTTCTCCAA
CGCCCTGCGCTCGGCGCTGCGCGAAGACCCGGACGTGATCCTGGTGGGCGAGATGCGCGACCTGGAAACCATCCGCCTCG
CGCTCACCGCTGCCGAGACCGGGCACCTGGTGTTCGGCACCCTGCATACCAGTTCGGCGGCCAAAACCATCGACCGTATT
GTGGACGTGTTTCCGGCAGCCGAAAAAGAAATGGTGCGTTCCATGCTGTCCGAATCGATCCGCGCGGTCATCGCGCAAAC
CCTGCTCAAAACCAAGGACGGCGCGGGTCGAGTGGCTGCGCATGAAATCATGATCGGCACCCCCGCCATCCGCAACCTGA
TCCGCGAGAACAAGATTGCACAGATGTATTCCTCCATCCAGACCGGGCAAAACGTCGGCATGCAAACCCTCGATCAATGC
CTGCAGGATCTGGTACGGCGCAACACGGTTTCAGTGGGTGAAGCGCGTTCCCGCGCTTCGAACAAAGACATGTTTGCCGG
ATAA
ATGGAAATCTCCGAACTGCTCGCCTTTGCTGTCAAGAACAAAGCCTCCGACCTGCATCTGTCGGCCGGCCTGCCGCCGAT
GATACGGGTACACGGCGACATCCGCCGCATCAATCTGCCCGCCCTGGATCACACTACGGTGCACGACATGGTGTACGACA
TCATGAACGATGGCCAGCGCAAAACCTATGAAGAATCGCTGGAGGTGGACTTTTCCTTCGAGGTTCCCACGCTGGCGCGC
TTTCGCGTCAATGCTTTCAACCAGAACCGCGGCTCGGGTGCCGTGTTCCGTACCATTCCCAGCAAGGTGCTGACGCTGGA
AGAACTCAATGCACCCAAGATTTTCAAGGACATATCCGACCAGCCGCGCGGCATCGTGCTGGTCACCGGCCCTACCGGTT
CGGGCAAATCCACCACGCTGGCGGCGATGGTGGACTACGTCAACGAAACCCAGTTCGGCCATATCCTGACCGTCGAAGAC
CCGATTGAATTCGTCCACCAGAGCAAAAAATGCGTGATCAACCAGCGTGAAGTGGGCCCGCACACGCAAAGCTTCTCCAA
CGCCCTGCGCTCGGCGCTGCGCGAAGACCCGGACGTGATCCTGGTGGGCGAGATGCGCGACCTGGAAACCATCCGCCTCG
CGCTCACCGCTGCCGAGACCGGGCACCTGGTGTTCGGCACCCTGCATACCAGTTCGGCGGCCAAAACCATCGACCGTATT
GTGGACGTGTTTCCGGCAGCCGAAAAAGAAATGGTGCGTTCCATGCTGTCCGAATCGATCCGCGCGGTCATCGCGCAAAC
CCTGCTCAAAACCAAGGACGGCGCGGGTCGAGTGGCTGCGCATGAAATCATGATCGGCACCCCCGCCATCCGCAACCTGA
TCCGCGAGAACAAGATTGCACAGATGTATTCCTCCATCCAGACCGGGCAAAACGTCGGCATGCAAACCCTCGATCAATGC
CTGCAGGATCTGGTACGGCGCAACACGGTTTCAGTGGGTGAAGCGCGTTCCCGCGCTTCGAACAAAGACATGTTTGCCGG
ATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii D1279779 |
77.101 |
99.424 |
0.767 |
| pilT | Acinetobacter nosocomialis M2 |
77.101 |
99.424 |
0.767 |
| pilT | Acinetobacter baumannii strain A118 |
77.101 |
99.424 |
0.767 |
| pilT | Pseudomonas aeruginosa PAK |
75.072 |
99.424 |
0.746 |
| pilT | Acinetobacter baylyi ADP1 |
74.783 |
99.424 |
0.744 |
| pilT | Pseudomonas stutzeri DSM 10701 |
74.783 |
99.424 |
0.744 |
| pilT | Neisseria meningitidis 8013 |
72.595 |
98.847 |
0.718 |
| pilT | Neisseria gonorrhoeae MS11 |
72.303 |
98.847 |
0.715 |
| pilT | Legionella pneumophila strain Lp02 |
71.304 |
99.424 |
0.709 |
| pilT | Legionella pneumophila strain ERS1305867 |
71.304 |
99.424 |
0.709 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
68.343 |
97.406 |
0.666 |
| pilT | Vibrio cholerae strain A1552 |
68.343 |
97.406 |
0.666 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.445 |
99.712 |
0.513 |
| pilU | Vibrio cholerae strain A1552 |
42.09 |
96.542 |
0.406 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.896 |
96.542 |
0.395 |
| pilU | Acinetobacter baylyi ADP1 |
40.058 |
98.559 |
0.395 |