Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACEUIV_RS00445 | Genome accession | NZ_CP169221 |
| Coordinates | 92498..93532 (-) | Length | 344 a.a. |
| NCBI ID | WP_022997480.1 | Uniprot ID | A0A9Q3ZB68 |
| Organism | Alloalcanivorax xenomutans strain A28 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 87498..98532
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEUIV_RS00425 | - | 88335..88943 (+) | 609 | WP_022997476.1 | FMN-dependent NADH-azoreductase | - |
| ACEUIV_RS00430 | - | 88991..89995 (+) | 1005 | WP_026948839.1 | glutathione S-transferase family protein | - |
| ACEUIV_RS00435 | - | 90336..91190 (+) | 855 | WP_022997478.1 | pirin family protein | - |
| ACEUIV_RS00440 | pilU | 91358..92479 (-) | 1122 | WP_022997479.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACEUIV_RS00445 | pilT | 92498..93532 (-) | 1035 | WP_022997480.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACEUIV_RS00450 | - | 93651..94355 (+) | 705 | WP_026948840.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACEUIV_RS00455 | proC | 94388..95200 (+) | 813 | WP_022997482.1 | pyrroline-5-carboxylate reductase | - |
| ACEUIV_RS00460 | - | 95700..96248 (+) | 549 | WP_022997221.1 | YggT family protein | - |
| ACEUIV_RS00465 | - | 96326..97249 (-) | 924 | WP_022997222.1 | hydroxymethylglutaryl-CoA lyase | - |
| ACEUIV_RS00470 | - | 97436..98287 (+) | 852 | WP_022997223.1 | triacylglycerol lipase | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38028.65 Da Isoelectric Point: 6.5061
>NTDB_id=1049869 ACEUIV_RS00445 WP_022997480.1 92498..93532(-) (pilT) [Alloalcanivorax xenomutans strain A28]
MDITELLAFSAKNGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHSLIYEIMNDKQRKDYEEFLETDFSFDVPSVAR
FRVNAFNQNRGAGAVFRTIPSKVLSMEELGMGKVFQNIASLPRGIVLVTGPTGSGKSTTLAAMMDYINNTRYEHILTIED
PIEFVHESKKCLVNQREVHRDTHGFAEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKAMVRSMLSESLQAVVSQTLMKKNGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGASVGMQTLDQCL
QGLVQRGLVSREVAREKAKNPDSI
MDITELLAFSAKNGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHSLIYEIMNDKQRKDYEEFLETDFSFDVPSVAR
FRVNAFNQNRGAGAVFRTIPSKVLSMEELGMGKVFQNIASLPRGIVLVTGPTGSGKSTTLAAMMDYINNTRYEHILTIED
PIEFVHESKKCLVNQREVHRDTHGFAEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKAMVRSMLSESLQAVVSQTLMKKNGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGASVGMQTLDQCL
QGLVQRGLVSREVAREKAKNPDSI
Nucleotide
Download Length: 1035 bp
>NTDB_id=1049869 ACEUIV_RS00445 WP_022997480.1 92498..93532(-) (pilT) [Alloalcanivorax xenomutans strain A28]
ATGGATATCACCGAATTGCTCGCCTTCAGCGCCAAGAACGGCGCTTCGGATTTGCACCTGTCCGCCGGTCTGCCGCCGAT
GATTCGCGTGGACGGCGACGTGCGCCGCATCAATCTGCCGCCCATGGAGCACAAGGAAGTGCACTCGCTGATCTACGAGA
TCATGAACGACAAGCAGCGCAAGGACTACGAGGAGTTCCTGGAAACCGACTTCTCCTTCGATGTGCCCAGCGTGGCGCGT
TTCCGGGTCAACGCCTTCAATCAGAACCGGGGCGCCGGCGCCGTCTTCCGGACCATTCCCTCCAAGGTGCTGAGCATGGA
GGAACTGGGCATGGGCAAGGTATTCCAGAACATCGCCTCGTTGCCACGGGGCATCGTGTTGGTCACCGGCCCCACCGGCT
CCGGTAAGTCCACCACCCTGGCGGCGATGATGGACTACATCAATAACACCCGCTACGAACACATCCTCACCATCGAGGAC
CCGATTGAATTCGTCCATGAATCAAAGAAATGTCTGGTCAACCAGCGGGAAGTGCATCGGGATACCCACGGCTTCGCCGA
AGCCCTGCGCTCGGCACTGCGGGAGGACCCGGACATCATCCTGGTGGGGGAGATGCGGGATCTGGAGACCATCCGGCTGG
CACTGACCGCCGCCGAAACCGGTCACCTGGTGTTCGGCACCCTGCACACCACCAGCGCCGCCAAGACCATCGACCGGGTG
GTGGACGTGTTCCCCGCCGAGGAGAAGGCCATGGTCCGCTCCATGCTTTCCGAATCCCTGCAAGCGGTGGTGTCGCAAAC
GCTGATGAAGAAAAACGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATCGGCACCCCGGCGATTCGAAACCTGATTC
GCGAGGACAAGGTGGCGCAGATGTATTCGGCGATCCAGACCGGCGCCTCGGTGGGCATGCAGACTCTGGATCAATGCCTG
CAAGGGCTGGTGCAGCGCGGACTGGTATCCCGCGAAGTGGCCCGGGAAAAAGCCAAGAACCCGGACTCAATCTGA
ATGGATATCACCGAATTGCTCGCCTTCAGCGCCAAGAACGGCGCTTCGGATTTGCACCTGTCCGCCGGTCTGCCGCCGAT
GATTCGCGTGGACGGCGACGTGCGCCGCATCAATCTGCCGCCCATGGAGCACAAGGAAGTGCACTCGCTGATCTACGAGA
TCATGAACGACAAGCAGCGCAAGGACTACGAGGAGTTCCTGGAAACCGACTTCTCCTTCGATGTGCCCAGCGTGGCGCGT
TTCCGGGTCAACGCCTTCAATCAGAACCGGGGCGCCGGCGCCGTCTTCCGGACCATTCCCTCCAAGGTGCTGAGCATGGA
GGAACTGGGCATGGGCAAGGTATTCCAGAACATCGCCTCGTTGCCACGGGGCATCGTGTTGGTCACCGGCCCCACCGGCT
CCGGTAAGTCCACCACCCTGGCGGCGATGATGGACTACATCAATAACACCCGCTACGAACACATCCTCACCATCGAGGAC
CCGATTGAATTCGTCCATGAATCAAAGAAATGTCTGGTCAACCAGCGGGAAGTGCATCGGGATACCCACGGCTTCGCCGA
AGCCCTGCGCTCGGCACTGCGGGAGGACCCGGACATCATCCTGGTGGGGGAGATGCGGGATCTGGAGACCATCCGGCTGG
CACTGACCGCCGCCGAAACCGGTCACCTGGTGTTCGGCACCCTGCACACCACCAGCGCCGCCAAGACCATCGACCGGGTG
GTGGACGTGTTCCCCGCCGAGGAGAAGGCCATGGTCCGCTCCATGCTTTCCGAATCCCTGCAAGCGGTGGTGTCGCAAAC
GCTGATGAAGAAAAACGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATCGGCACCCCGGCGATTCGAAACCTGATTC
GCGAGGACAAGGTGGCGCAGATGTATTCGGCGATCCAGACCGGCGCCTCGGTGGGCATGCAGACTCTGGATCAATGCCTG
CAAGGGCTGGTGCAGCGCGGACTGGTATCCCGCGAAGTGGCCCGGGAAAAAGCCAAGAACCCGGACTCAATCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
88.663 |
100 |
0.887 |
| pilT | Pseudomonas stutzeri DSM 10701 |
86.919 |
100 |
0.869 |
| pilT | Acinetobacter nosocomialis M2 |
84.302 |
100 |
0.843 |
| pilT | Acinetobacter baumannii D1279779 |
84.302 |
100 |
0.843 |
| pilT | Acinetobacter baumannii strain A118 |
84.302 |
100 |
0.843 |
| pilT | Acinetobacter baylyi ADP1 |
81.105 |
100 |
0.811 |
| pilT | Legionella pneumophila strain Lp02 |
75.588 |
98.837 |
0.747 |
| pilT | Legionella pneumophila strain ERS1305867 |
75.588 |
98.837 |
0.747 |
| pilT | Neisseria meningitidis 8013 |
69.855 |
100 |
0.701 |
| pilT | Neisseria gonorrhoeae MS11 |
69.275 |
100 |
0.695 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
68.249 |
97.965 |
0.669 |
| pilT | Vibrio cholerae strain A1552 |
68.249 |
97.965 |
0.669 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.339 |
99.419 |
0.52 |
| pilU | Vibrio cholerae strain A1552 |
40.29 |
100 |
0.404 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.299 |
97.384 |
0.392 |
| pilU | Acinetobacter baylyi ADP1 |
38.15 |
100 |
0.384 |