Detailed information NTG1049868

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACEUIV_RS00440
• Genome accession: NZ_CP169221
• Coordinates: 91358..92479 (-)
• Length: 373 a.a.
• NCBI ID: WP_022997479.1
• Uniprot ID: A0A9Q3ZEX2
• Organism: Alloalcanivorax xenomutans strain A28
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 86358..97479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEUIV_RS00415	-	86763..87296 (-)	534	WP_026948837.1	DUF4136 domain-containing protein	-
ACEUIV_RS00420	-	87344..88237 (-)	894	WP_026948838.1	LysR family transcriptional regulator	-
ACEUIV_RS00425	-	88335..88943 (+)	609	WP_022997476.1	FMN-dependent NADH-azoreductase	-
ACEUIV_RS00430	-	88991..89995 (+)	1005	WP_026948839.1	glutathione S-transferase family protein	-
ACEUIV_RS00435	-	90336..91190 (+)	855	WP_022997478.1	pirin family protein	-
ACEUIV_RS00440	pilU	91358..92479 (-)	1122	WP_022997479.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACEUIV_RS00445	pilT	92498..93532 (-)	1035	WP_022997480.1	type IV pilus twitching motility protein PilT	Machinery gene
ACEUIV_RS00450	-	93651..94355 (+)	705	WP_026948840.1	YggS family pyridoxal phosphate-dependent enzyme	-
ACEUIV_RS00455	proC	94388..95200 (+)	813	WP_022997482.1	pyrroline-5-carboxylate reductase	-
ACEUIV_RS00460	-	95700..96248 (+)	549	WP_022997221.1	YggT family protein	-
ACEUIV_RS00465	-	96326..97249 (-)	924	WP_022997222.1	hydroxymethylglutaryl-CoA lyase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41549.72 Da
• Isoelectric Point: 6.7399

>NTDB_id=1049868 ACEUIV_RS00440 WP_022997479.1 91358..92479(-) (pilU) [Alloalcanivorax xenomutans strain A28]
MEFEDLLKLMVQKGGSDLFITAGVPPSMKVHGKVVPVTRNALTPDMTRDLVFGVMSEKQRKEFVDQHECNFALSSRGIGR
FRVSAFYQRNLVGMVLRRIETKIPDADELRLPPIIKDLAMTKRGLVIFVGATGTGKSTSLASMIGHRNRNSKGHIISIED
PIEFIHQHQGCIVTQREVGLDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIAFAETGHLCLATLHANNANQALDRI
IHFFPADRHRQLWMDLSLNLRGIVAQQLIPTPDGKGRRAAIEVLLNTPLVADHIRKGEVHLLKALMGKSREQGMQTFDQA
LYDLYDAGEITYEDAIAHADSPNDLRLMIKLANETDASSLDHATRGLSIEDSD

Nucleotide

• Length: 1122 bp

>NTDB_id=1049868 ACEUIV_RS00440 WP_022997479.1 91358..92479(-) (pilU) [Alloalcanivorax xenomutans strain A28]
ATGGAATTCGAAGATCTGCTCAAACTGATGGTGCAAAAAGGCGGCTCGGACTTGTTCATCACCGCCGGTGTTCCACCAAG
TATGAAAGTCCACGGCAAGGTGGTGCCGGTTACCCGTAACGCCCTGACCCCGGACATGACCCGGGATCTGGTGTTCGGTG
TGATGTCGGAAAAGCAGCGCAAGGAGTTCGTCGACCAGCACGAATGCAATTTCGCGCTATCCTCGCGGGGCATTGGCCGC
TTCCGCGTGTCCGCTTTTTACCAGCGCAATCTGGTGGGCATGGTGTTGCGGCGCATCGAGACCAAGATACCCGACGCCGA
CGAACTGCGGCTGCCGCCGATCATCAAGGACCTGGCGATGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGGAAATCCACCTCCCTGGCGTCAATGATCGGCCACCGTAATCGCAACTCCAAAGGCCATATCATCTCCATTGAGGAT
CCGATCGAATTCATCCACCAGCATCAGGGCTGCATTGTCACGCAACGGGAAGTAGGCCTGGATACGGACAGTTTCGAGAT
CGCCCTCAAGAACACGCTGCGACAGGCACCGGATGTGATTCTGATCGGTGAGATCCGCAGCCGCGAAGTGATGGATTACG
CCATTGCCTTCGCCGAAACCGGCCATCTGTGTCTGGCCACCCTGCATGCCAACAACGCCAACCAGGCGCTGGACCGGATC
ATTCACTTTTTCCCCGCCGACCGTCACCGGCAGTTATGGATGGACCTCTCCCTGAACCTGCGCGGCATTGTCGCCCAGCA
ACTGATCCCGACGCCGGACGGCAAGGGCCGCCGCGCCGCCATCGAAGTGCTGCTGAACACGCCACTGGTGGCGGACCATA
TCCGTAAAGGCGAAGTGCATTTGCTCAAGGCGCTGATGGGCAAATCCCGGGAGCAGGGCATGCAGACTTTCGATCAGGCC
CTCTATGATCTTTATGATGCCGGCGAAATCACTTACGAGGACGCGATTGCCCACGCCGACTCCCCCAACGATCTGCGCCT
GATGATCAAGCTCGCCAACGAAACCGACGCCTCCAGCCTGGACCACGCCACCCGTGGCCTGAGCATCGAGGACTCGGACT
GA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (116-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	76.944	100	0.769
pilU	Acinetobacter baylyi ADP1	67.385	99.464	0.67
pilU	Vibrio cholerae strain A1552	56.267	96.247	0.542
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.017	95.71	0.402