Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ABU614_RS23130 | Genome accession | NZ_CP159925 |
| Coordinates | 5323236..5324273 (-) | Length | 345 a.a. |
| NCBI ID | WP_336132370.1 | Uniprot ID | A0AAU8MUY9 |
| Organism | Lysobacter firmicutimachus strain SR10 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5318236..5329273
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABU614_RS23125 (ABU614_23125) | pilU | 5321948..5323117 (-) | 1170 | WP_064749330.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ABU614_RS23130 (ABU614_23130) | pilT | 5323236..5324273 (-) | 1038 | WP_336132370.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ABU614_RS23135 (ABU614_23135) | - | 5324448..5325125 (+) | 678 | WP_363800962.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ABU614_RS23140 (ABU614_23140) | proC | 5325268..5326104 (+) | 837 | WP_064749333.1 | pyrroline-5-carboxylate reductase | - |
| ABU614_RS23145 (ABU614_23145) | - | 5326101..5326571 (+) | 471 | WP_336132373.1 | DUF4426 domain-containing protein | - |
| ABU614_RS23150 (ABU614_23150) | - | 5326826..5327620 (+) | 795 | WP_336132374.1 | cobalamin-binding protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38562.39 Da Isoelectric Point: 6.7270
>NTDB_id=1016832 ABU614_RS23130 WP_336132370.1 5323236..5324273(-) (pilT) [Lysobacter firmicutimachus strain SR10]
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDFEEFLEVDFSFEIPGLAR
FRVNAFNQNRGAGAVFRTIPSEVLSLEDLGCPPIFRQLIEQPQGLILVTGPTGSGKSTTLAAMIDHINKNEYAHILSVED
PIEFVHTSQKCLINQREVHRDTHGFNEALRSALREDPDYILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPSGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGIPAIRNLIREDKVAQMYSAIQTGQAYGMMTLDQHL
QDLVKRGMILRPQAREYAKDKRLFD
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDFEEFLEVDFSFEIPGLAR
FRVNAFNQNRGAGAVFRTIPSEVLSLEDLGCPPIFRQLIEQPQGLILVTGPTGSGKSTTLAAMIDHINKNEYAHILSVED
PIEFVHTSQKCLINQREVHRDTHGFNEALRSALREDPDYILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPSGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGIPAIRNLIREDKVAQMYSAIQTGQAYGMMTLDQHL
QDLVKRGMILRPQAREYAKDKRLFD
Nucleotide
Download Length: 1038 bp
>NTDB_id=1016832 ABU614_RS23130 WP_336132370.1 5323236..5324273(-) (pilT) [Lysobacter firmicutimachus strain SR10]
ATGGATATCGCCGAACTTCTGGCGTTTTCGGTCAAGAACAAAGCATCCGACTTGCATCTGTCGGCGGGCCTGCCGCCGAT
GATCCGGGTCGACGGCGACGTGCGCCGGATCAACATCCCGGCCCTGGACCACAAGCAGGTCCACGCGCTGGTCTACGACA
TCATGTCGGACAAGCAGCGTCGCGACTTCGAAGAATTCCTCGAGGTCGACTTCTCGTTCGAGATCCCGGGCCTGGCGCGC
TTCCGCGTCAATGCCTTCAATCAGAACCGCGGCGCCGGCGCGGTGTTCCGTACCATTCCTTCGGAAGTGCTGAGCCTGGA
AGACCTGGGCTGCCCGCCGATCTTCCGTCAGCTGATCGAACAACCGCAGGGCCTGATCCTGGTGACCGGGCCGACCGGCT
CGGGCAAGTCGACCACGCTCGCGGCGATGATCGACCACATCAACAAGAACGAGTACGCGCACATCCTCTCGGTCGAGGAC
CCGATCGAATTCGTGCACACCTCGCAGAAGTGCCTGATCAACCAGCGCGAGGTCCACCGCGACACCCACGGCTTCAACGA
AGCCTTGCGCTCGGCGCTGCGCGAAGACCCCGACTACATCCTGGTCGGCGAGTTGCGCGACCTGGAGACCATCCGCCTGG
CGCTGACCGCCGCGGAAACCGGCCACCTGGTGTTCGGCACCCTGCACACGTCCTCGGCGGCCAAGACCATCGACCGCATC
ATCGACGTGTTCCCCTCGGGCGAAAAGCCGATGGTGCGTTCGATGCTGTCCGAATCGCTGCGCGCGGTGATCTCGCAAGC
GCTGCTGAAGAAGGTCGGCGGCGGCCGTACCGCGGCCTGGGAAATCATGGTCGGCATCCCGGCCATCCGCAACCTGATCC
GCGAGGACAAGGTCGCGCAGATGTACTCGGCGATCCAGACCGGCCAGGCCTACGGCATGATGACCCTCGACCAGCATCTG
CAGGACCTGGTCAAGCGCGGCATGATCCTGCGCCCGCAGGCGCGCGAGTACGCCAAGGACAAGCGCTTGTTCGATTGA
ATGGATATCGCCGAACTTCTGGCGTTTTCGGTCAAGAACAAAGCATCCGACTTGCATCTGTCGGCGGGCCTGCCGCCGAT
GATCCGGGTCGACGGCGACGTGCGCCGGATCAACATCCCGGCCCTGGACCACAAGCAGGTCCACGCGCTGGTCTACGACA
TCATGTCGGACAAGCAGCGTCGCGACTTCGAAGAATTCCTCGAGGTCGACTTCTCGTTCGAGATCCCGGGCCTGGCGCGC
TTCCGCGTCAATGCCTTCAATCAGAACCGCGGCGCCGGCGCGGTGTTCCGTACCATTCCTTCGGAAGTGCTGAGCCTGGA
AGACCTGGGCTGCCCGCCGATCTTCCGTCAGCTGATCGAACAACCGCAGGGCCTGATCCTGGTGACCGGGCCGACCGGCT
CGGGCAAGTCGACCACGCTCGCGGCGATGATCGACCACATCAACAAGAACGAGTACGCGCACATCCTCTCGGTCGAGGAC
CCGATCGAATTCGTGCACACCTCGCAGAAGTGCCTGATCAACCAGCGCGAGGTCCACCGCGACACCCACGGCTTCAACGA
AGCCTTGCGCTCGGCGCTGCGCGAAGACCCCGACTACATCCTGGTCGGCGAGTTGCGCGACCTGGAGACCATCCGCCTGG
CGCTGACCGCCGCGGAAACCGGCCACCTGGTGTTCGGCACCCTGCACACGTCCTCGGCGGCCAAGACCATCGACCGCATC
ATCGACGTGTTCCCCTCGGGCGAAAAGCCGATGGTGCGTTCGATGCTGTCCGAATCGCTGCGCGCGGTGATCTCGCAAGC
GCTGCTGAAGAAGGTCGGCGGCGGCCGTACCGCGGCCTGGGAAATCATGGTCGGCATCCCGGCCATCCGCAACCTGATCC
GCGAGGACAAGGTCGCGCAGATGTACTCGGCGATCCAGACCGGCCAGGCCTACGGCATGATGACCCTCGACCAGCATCTG
CAGGACCTGGTCAAGCGCGGCATGATCCTGCGCCCGCAGGCGCGCGAGTACGCCAAGGACAAGCGCTTGTTCGATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
79.07 |
99.71 |
0.788 |
| pilT | Acinetobacter baumannii D1279779 |
79.07 |
99.71 |
0.788 |
| pilT | Acinetobacter baumannii strain A118 |
79.07 |
99.71 |
0.788 |
| pilT | Acinetobacter baylyi ADP1 |
77.616 |
99.71 |
0.774 |
| pilT | Pseudomonas stutzeri DSM 10701 |
77.616 |
99.71 |
0.774 |
| pilT | Pseudomonas aeruginosa PAK |
77.876 |
98.261 |
0.765 |
| pilT | Legionella pneumophila strain Lp02 |
74.128 |
99.71 |
0.739 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.128 |
99.71 |
0.739 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
70.213 |
95.362 |
0.67 |
| pilT | Vibrio cholerae strain A1552 |
70.213 |
95.362 |
0.67 |
| pilT | Neisseria meningitidis 8013 |
65.982 |
98.841 |
0.652 |
| pilT | Neisseria gonorrhoeae MS11 |
65.689 |
98.841 |
0.649 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.275 |
100 |
0.493 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.118 |
98.261 |
0.394 |
| pilU | Acinetobacter baylyi ADP1 |
39.706 |
98.551 |
0.391 |
| pilU | Vibrio cholerae strain A1552 |
40.308 |
94.203 |
0.38 |