Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ABWH88_RS08940 | Genome accession | NZ_CP159479 |
| Coordinates | 1849955..1850989 (-) | Length | 344 a.a. |
| NCBI ID | WP_008174189.1 | Uniprot ID | A0A352INV9 |
| Organism | Marinobacter adhaerens strain ac5 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1844955..1855989
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWH88_RS08925 (ABWH88_08900) | - | 1846862..1847236 (+) | 375 | WP_008174194.1 | hypothetical protein | - |
| ABWH88_RS08930 (ABWH88_08905) | - | 1847268..1848551 (-) | 1284 | WP_014575889.1 | OmpP1/FadL family transporter | - |
| ABWH88_RS08935 (ABWH88_08910) | pilU | 1848791..1849912 (-) | 1122 | WP_014575888.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ABWH88_RS08940 (ABWH88_08915) | pilT | 1849955..1850989 (-) | 1035 | WP_008174189.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ABWH88_RS08945 (ABWH88_08920) | - | 1851130..1851834 (+) | 705 | WP_041644903.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ABWH88_RS08950 (ABWH88_08925) | proC | 1851896..1852729 (+) | 834 | WP_014575886.1 | pyrroline-5-carboxylate reductase | - |
| ABWH88_RS08955 (ABWH88_08930) | - | 1852752..1853336 (+) | 585 | WP_008174183.1 | YggT family protein | - |
| ABWH88_RS08960 (ABWH88_08935) | - | 1853580..1855543 (+) | 1964 | Protein_1744 | dynamin family protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38100.79 Da Isoelectric Point: 6.2443
>NTDB_id=1013752 ABWH88_RS08940 WP_008174189.1 1849955..1850989(-) (pilT) [Marinobacter adhaerens strain ac5]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDVSSVPRGLVLVTGPTGSGKSTTLAAMIDYINDTRYEHVLTIED
PIEFVHDSKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDVSSVPRGLVLVTGPTGSGKSTTLAAMIDYINDTRYEHVLTIED
PIEFVHDSKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
Nucleotide
Download Length: 1035 bp
>NTDB_id=1013752 ABWH88_RS08940 WP_008174189.1 1849955..1850989(-) (pilT) [Marinobacter adhaerens strain ac5]
ATGGATATTACTGAACTGCTTGCCTTTTCGGCGAAACAGGGTGCGTCTGACTTGCACCTCTCTGCCGGTTTGCCCCCGAT
GATTCGTGTTGATGGTGATGTACGCCGCATCAACCTGCCGCCCATGGAGCACAAAGAAGTCCACGGGCTCATCTACGACA
TCATGAATGACAAGCAGCGTAAGGACTACGAGGAATTCCTGGAAACCGACTTCTCCTTCGAAGTTCCGGGCGTCGCCCGT
TTCCGTGTTAACGCTTTTAACCAGAACCGTGGCGCAGGCGCCGTGTTCCGGACCATCCCTTCCAAAGTACTGACCATGGA
AGATCTGGGTATGGGGCAGGTGTTCAAGGACGTGTCTTCAGTGCCTCGTGGTCTGGTACTGGTGACCGGCCCGACGGGCT
CGGGTAAGTCCACCACGCTGGCGGCGATGATCGATTACATCAACGACACCCGCTACGAACACGTTCTCACGATTGAAGAC
CCCATCGAATTCGTACACGACTCCAAAAAATGCCTGGTGAACCAGCGGGAAGTGCACCGGGATACTTTGGGCTTCAACGA
AGCACTGCGGTCAGCCCTGCGGGAAGACCCCGACATCATCCTGGTTGGTGAGCTCCGGGATCTGGAAACCATCCGCCTGG
CACTGACAGCGGCTGAGACCGGCCACCTTGTATTCGGCACCCTGCACACCACCTCCGCGGCCAAAACCATTGACCGTGTG
GTCGACGTTTTCCCGGCAGAGGAAAAGTCCATGGTGCGGTCGATGCTGTCTGAATCCCTGCAGGCGGTTATTTCCCAGAC
CCTGATGAAGAAAATGGGTGGCGGCCGTATTGCCGCGCACGAGATCATGATCGGTACGTCTGCGATCCGGAACCTGATTC
GGGAAGACAAGATTGCCCAGATGTACTCGTCGATTCAGACCGGTGGCTCTCTGGGCATGCAGACGCTGGATCAGTGCCTT
GAGCGGCTGCTGCAGAAAGGACTGATTTCCCGCGAAGCTGCGCGGGCTAAGGCGAAGATGCCGGATAACTTCTGA
ATGGATATTACTGAACTGCTTGCCTTTTCGGCGAAACAGGGTGCGTCTGACTTGCACCTCTCTGCCGGTTTGCCCCCGAT
GATTCGTGTTGATGGTGATGTACGCCGCATCAACCTGCCGCCCATGGAGCACAAAGAAGTCCACGGGCTCATCTACGACA
TCATGAATGACAAGCAGCGTAAGGACTACGAGGAATTCCTGGAAACCGACTTCTCCTTCGAAGTTCCGGGCGTCGCCCGT
TTCCGTGTTAACGCTTTTAACCAGAACCGTGGCGCAGGCGCCGTGTTCCGGACCATCCCTTCCAAAGTACTGACCATGGA
AGATCTGGGTATGGGGCAGGTGTTCAAGGACGTGTCTTCAGTGCCTCGTGGTCTGGTACTGGTGACCGGCCCGACGGGCT
CGGGTAAGTCCACCACGCTGGCGGCGATGATCGATTACATCAACGACACCCGCTACGAACACGTTCTCACGATTGAAGAC
CCCATCGAATTCGTACACGACTCCAAAAAATGCCTGGTGAACCAGCGGGAAGTGCACCGGGATACTTTGGGCTTCAACGA
AGCACTGCGGTCAGCCCTGCGGGAAGACCCCGACATCATCCTGGTTGGTGAGCTCCGGGATCTGGAAACCATCCGCCTGG
CACTGACAGCGGCTGAGACCGGCCACCTTGTATTCGGCACCCTGCACACCACCTCCGCGGCCAAAACCATTGACCGTGTG
GTCGACGTTTTCCCGGCAGAGGAAAAGTCCATGGTGCGGTCGATGCTGTCTGAATCCCTGCAGGCGGTTATTTCCCAGAC
CCTGATGAAGAAAATGGGTGGCGGCCGTATTGCCGCGCACGAGATCATGATCGGTACGTCTGCGATCCGGAACCTGATTC
GGGAAGACAAGATTGCCCAGATGTACTCGTCGATTCAGACCGGTGGCTCTCTGGGCATGCAGACGCTGGATCAGTGCCTT
GAGCGGCTGCTGCAGAAAGGACTGATTTCCCGCGAAGCTGCGCGGGCTAAGGCGAAGATGCCGGATAACTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
90.116 |
100 |
0.901 |
| pilT | Pseudomonas stutzeri DSM 10701 |
89.535 |
100 |
0.895 |
| pilT | Acinetobacter nosocomialis M2 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baumannii D1279779 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baumannii strain A118 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baylyi ADP1 |
81.395 |
100 |
0.814 |
| pilT | Legionella pneumophila strain Lp02 |
77.219 |
98.256 |
0.759 |
| pilT | Legionella pneumophila strain ERS1305867 |
77.219 |
98.256 |
0.759 |
| pilT | Neisseria gonorrhoeae MS11 |
67.941 |
98.837 |
0.672 |
| pilT | Neisseria meningitidis 8013 |
67.941 |
98.837 |
0.672 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
65.882 |
98.837 |
0.651 |
| pilT | Vibrio cholerae strain A1552 |
65.882 |
98.837 |
0.651 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.014 |
100 |
0.512 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.194 |
97.384 |
0.401 |
| pilU | Acinetobacter baylyi ADP1 |
39.017 |
100 |
0.392 |
| pilU | Vibrio cholerae strain A1552 |
39.403 |
97.384 |
0.384 |