Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | EL297_RS11425 | Genome accession | NZ_LR134525 |
| Coordinates | 1923835..1924872 (-) | Length | 345 a.a. |
| NCBI ID | WP_226893076.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain NCTC10025 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1918835..1929872
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL297_RS11410 (NCTC10025_01916) | yccS | 1920010..1922160 (-) | 2151 | WP_082308663.1 | YccS family putative transporter | - |
| EL297_RS11420 (NCTC10025_01917) | pilU | 1922446..1923672 (-) | 1227 | WP_134990390.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| EL297_RS11425 (NCTC10025_01918) | pilT | 1923835..1924872 (-) | 1038 | WP_226893076.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| EL297_RS11430 (NCTC10025_01919) | - | 1924998..1925684 (+) | 687 | WP_002239404.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| EL297_RS11435 (NCTC10025_01920) | - | 1925684..1926091 (+) | 408 | WP_002239400.1 | hypothetical protein | - |
| EL297_RS11440 (NCTC10025_01921) | proC | 1926122..1926931 (+) | 810 | WP_226893052.1 | pyrroline-5-carboxylate reductase | - |
| EL297_RS11450 (NCTC10025_01922) | dksA | 1927079..1927495 (+) | 417 | WP_002231430.1 | RNA polymerase-binding protein DksA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 37796.19 Da Isoelectric Point: 7.0893
>NTDB_id=1003535 EL297_RS11425 WP_226893076.1 1923835..1924872(-) (pilT) [Neisseria meningitidis strain NCTC10025]
MTDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFR
VNAFNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIEDPI
EFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRIVD
VFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQ
SLVRQGLIAPEVARRRAQNSESMSF
MTDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFR
VNAFNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIEDPI
EFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRIVD
VFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQ
SLVRQGLIAPEVARRRAQNSESMSF
Nucleotide
Download Length: 1038 bp
>NTDB_id=1003535 EL297_RS11425 WP_226893076.1 1923835..1924872(-) (pilT) [Neisseria meningitidis strain NCTC10025]
ATTACCGACTTACTCGCCTTCGGCGCTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTATGATTCG
GGTTCACGGCGATATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGTAATATGGTAACTTCGGTGATGA
ACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGATTCCGC
GTCAACGCCTTCAACACCGGCCGCGGTCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGAAGAATT
GAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTATTGGTTACCGGCCCTACCGGTTCGGGCA
AATCGACCACGCTTGCCGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGACCCGATC
GAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAGCGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAACGCGCT
GCGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCCGAAACCATCGGCTTGGCACTGA
CCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCAGCAAAAACCGTCGACCGTATCGTGGAC
GTATTCCCGGCGGGAGAAAAAGAAATGGTGCGCTCTATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAACCTGCT
GAAAACGCACGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCATCCGCG
AAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCAGGCGAGCGGTATGCAGACAATGGACCAATCGCTGCAA
TCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGTCGCACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTTCTGA
ATTACCGACTTACTCGCCTTCGGCGCTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTATGATTCG
GGTTCACGGCGATATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGTAATATGGTAACTTCGGTGATGA
ACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGATTCCGC
GTCAACGCCTTCAACACCGGCCGCGGTCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGAAGAATT
GAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTATTGGTTACCGGCCCTACCGGTTCGGGCA
AATCGACCACGCTTGCCGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGACCCGATC
GAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAGCGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAACGCGCT
GCGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCCGAAACCATCGGCTTGGCACTGA
CCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCAGCAAAAACCGTCGACCGTATCGTGGAC
GTATTCCCGGCGGGAGAAAAAGAAATGGTGCGCTCTATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAACCTGCT
GAAAACGCACGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCATCCGCG
AAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCAGGCGAGCGGTATGCAGACAATGGACCAATCGCTGCAA
TCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGTCGCACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria meningitidis 8013 |
99.42 |
100 |
0.994 |
| pilT | Neisseria gonorrhoeae MS11 |
99.13 |
100 |
0.991 |
| pilT | Acinetobacter baumannii D1279779 |
67.93 |
99.42 |
0.675 |
| pilT | Acinetobacter baumannii strain A118 |
67.93 |
99.42 |
0.675 |
| pilT | Acinetobacter nosocomialis M2 |
67.93 |
99.42 |
0.675 |
| pilT | Acinetobacter baylyi ADP1 |
67.347 |
99.42 |
0.67 |
| pilT | Pseudomonas stutzeri DSM 10701 |
67.055 |
99.42 |
0.667 |
| pilT | Pseudomonas aeruginosa PAK |
66.472 |
99.42 |
0.661 |
| pilT | Legionella pneumophila strain Lp02 |
64.602 |
98.261 |
0.635 |
| pilT | Legionella pneumophila strain ERS1305867 |
64.602 |
98.261 |
0.635 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
64.329 |
95.072 |
0.612 |
| pilT | Vibrio cholerae strain A1552 |
64.329 |
95.072 |
0.612 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.709 |
97.681 |
0.525 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.588 |
98.551 |
0.4 |
| pilU | Acinetobacter baylyi ADP1 |
38.372 |
99.71 |
0.383 |
| pilU | Vibrio cholerae strain A1552 |
39.104 |
97.101 |
0.38 |