Detailed information NTG0939014

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: ACEY2B_RS05910
• Genome accession: NZ_CP169315
• Coordinates: 1204457..1205527 (+)
• Length: 356 a.a.
• NCBI ID: WP_003131037.1
• Uniprot ID: Q9CG78
• Organism: Lactococcus lactis strain IFLLLBEK1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1199457..1210527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEY2B_RS05885 (ACEY2B_05885)	arsB	1200487..1201539 (+)	1053	WP_021723429.1	ACR3 family arsenite efflux transporter	-
ACEY2B_RS05890 (ACEY2B_05890)	-	1201548..1201751 (+)	204	WP_023189252.1	hypothetical protein	-
ACEY2B_RS05895 (ACEY2B_05895)	-	1201828..1202103 (-)	276	WP_374788288.1	hypothetical protein	-
ACEY2B_RS05900 (ACEY2B_05900)	xerS	1202550..1203605 (+)	1056	WP_374788289.1	tyrosine recombinase XerS	Machinery gene
ACEY2B_RS05905 (ACEY2B_05905)	-	1203689..1203976 (+)	288	WP_200984567.1	hypothetical protein	-
ACEY2B_RS05910 (ACEY2B_05910)	xerS	1204457..1205527 (+)	1071	WP_003131037.1	tyrosine recombinase XerS	Machinery gene
ACEY2B_RS05915 (ACEY2B_05915)	trmFO	1205572..1206915 (-)	1344	WP_003131150.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
ACEY2B_RS05920 (ACEY2B_05920)	topA	1206987..1209119 (-)	2133	WP_015426411.1	type I DNA topoisomerase	-
ACEY2B_RS05925 (ACEY2B_05925)	dprA	1209381..1210229 (-)	849	WP_015426410.1	DNA-processing protein DprA	Machinery gene

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41397.21 Da
• Isoelectric Point: 9.6568

>NTDB_id=939014 ACEY2B_RS05910 WP_003131037.1 1204457..1205527(+) (xerS) [Lactococcus lactis strain IFLLLBEK1]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKTYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQAFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=939014 ACEY2B_RS05910 WP_003131037.1 1204457..1205527(+) (xerS) [Lactococcus lactis strain IFLLLBEK1]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCACTCTCGGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACCCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATACGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTGACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAACTTATTTTGAAAGATACTTGGAGGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACTGCATTTTTTGTGACACTTTATAGAGATGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAAGCTTTTAAAGTACGAGTGACCCCTCACAAACTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCCCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCCACTCAAGTTACAGACCTTTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (182-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: Q9CG78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767