Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | U1R68_RS04040 | Genome accession | NZ_CP140126 |
| Coordinates | 904783..905799 (+) | Length | 338 a.a. |
| NCBI ID | WP_350238711.1 | Uniprot ID | - |
| Organism | Pectobacterium colocasium strain MT27-1 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 899783..910799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U1R68_RS04010 (U1R68_03990) | hemW | 900472..901614 (-) | 1143 | WP_350238708.1 | radical SAM family heme chaperone HemW | - |
| U1R68_RS04015 (U1R68_03995) | - | 901607..902200 (-) | 594 | WP_263057989.1 | XTP/dITP diphosphatase | - |
| U1R68_RS04020 (U1R68_04000) | yggU | 902232..902522 (-) | 291 | WP_010279110.1 | DUF167 family protein YggU | - |
| U1R68_RS04025 (U1R68_04005) | - | 902519..903073 (-) | 555 | WP_350238709.1 | YggT family protein | - |
| U1R68_RS04030 (U1R68_04010) | proC | 903122..903943 (-) | 822 | WP_350238710.1 | pyrroline-5-carboxylate reductase | - |
| U1R68_RS04035 (U1R68_04015) | - | 904034..904762 (-) | 729 | WP_225085677.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| U1R68_RS04040 (U1R68_04020) | pilT | 904783..905799 (+) | 1017 | WP_350238711.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| U1R68_RS04045 (U1R68_04025) | - | 905768..907594 (-) | 1827 | WP_350238712.1 | diguanylate cyclase | - |
| U1R68_RS04050 (U1R68_04030) | - | 908122..909693 (-) | 1572 | WP_350238713.1 | methyl-accepting chemotaxis protein | - |
| U1R68_RS04055 (U1R68_04035) | nsrR | 909988..910413 (+) | 426 | WP_010279087.1 | nitric oxide-sensing transcriptional repressor NsrR | - |
Sequence
Protein
Download Length: 338 a.a. Molecular weight: 36851.21 Da Isoelectric Point: 6.8192
>NTDB_id=912973 U1R68_RS04040 WP_350238711.1 904783..905799(+) (pilT) [Pectobacterium colocasium strain MT27-1]
MELDEWMVRSVKHNASDLHLCSGHPPVLRVDGRLQPENTLPRLTPEQVAQWCNAWLEPAQREQLRQFGQVDGALMLPDGQ
RLRVNVFRQREGLSAALRIIPSAQPSLDGLQAPPVLSMLLEKPNGLILITGATGSGKSTTLAAMIGALNDSSDRHVITLE
DPIEFIHVSRRCLIQQREIGAHSASFAQALRAALREDPDVILLGELRDTETIRLALTAAETGHLVLSTLHTRSASQAVDR
LIDVFPGEEKAYVRSQLATCLQAVVTQRLLPAAQGGRIALYEVLTATAAVSNLIREGKTHQLPGLIQTGTAAGMQTFEQS
YQQRCRDGLISHSCALAV
MELDEWMVRSVKHNASDLHLCSGHPPVLRVDGRLQPENTLPRLTPEQVAQWCNAWLEPAQREQLRQFGQVDGALMLPDGQ
RLRVNVFRQREGLSAALRIIPSAQPSLDGLQAPPVLSMLLEKPNGLILITGATGSGKSTTLAAMIGALNDSSDRHVITLE
DPIEFIHVSRRCLIQQREIGAHSASFAQALRAALREDPDVILLGELRDTETIRLALTAAETGHLVLSTLHTRSASQAVDR
LIDVFPGEEKAYVRSQLATCLQAVVTQRLLPAAQGGRIALYEVLTATAAVSNLIREGKTHQLPGLIQTGTAAGMQTFEQS
YQQRCRDGLISHSCALAV
Nucleotide
Download Length: 1017 bp
>NTDB_id=912973 U1R68_RS04040 WP_350238711.1 904783..905799(+) (pilT) [Pectobacterium colocasium strain MT27-1]
ATGGAATTGGATGAGTGGATGGTGCGTAGTGTAAAACATAATGCCTCGGATCTGCACCTTTGTAGCGGCCACCCTCCGGT
GCTACGAGTGGATGGGCGGCTACAGCCTGAAAATACCTTACCACGTTTAACGCCGGAGCAGGTGGCGCAATGGTGCAATG
CCTGGCTCGAACCCGCGCAGCGAGAGCAACTGCGGCAGTTTGGTCAGGTGGACGGCGCGTTAATGCTGCCCGATGGGCAA
CGTCTGCGGGTGAATGTGTTTCGCCAGCGGGAAGGGCTGTCTGCGGCGCTGCGTATTATTCCGTCGGCTCAGCCTTCATT
GGACGGGCTACAGGCGCCACCCGTTCTGTCGATGCTGCTGGAGAAACCGAACGGACTGATCCTGATTACTGGTGCGACGG
GGAGCGGCAAGTCCACGACGCTGGCAGCCATGATCGGGGCGTTAAACGACAGCAGCGATCGCCATGTGATTACGCTGGAG
GATCCGATCGAGTTTATCCATGTCAGCCGGCGTTGCCTGATTCAACAGCGAGAGATCGGTGCACACAGCGCGTCTTTTGC
GCAGGCGTTACGGGCGGCATTGCGGGAAGATCCCGATGTGATTCTGCTGGGGGAACTTCGTGATACGGAGACGATTCGGC
TGGCGCTGACGGCGGCGGAAACCGGCCATCTGGTGTTATCTACGCTGCATACACGCAGCGCATCGCAGGCGGTCGATCGT
CTGATTGACGTCTTTCCCGGTGAAGAAAAAGCCTATGTTCGCAGCCAGCTCGCCACCTGTTTGCAGGCCGTGGTGACGCA
AAGGCTGTTGCCTGCAGCGCAAGGCGGCCGCATTGCGCTTTATGAAGTGCTGACGGCGACTGCGGCGGTCAGCAACCTGA
TTCGGGAAGGGAAAACGCATCAGCTTCCCGGCCTGATTCAAACGGGAACGGCGGCGGGAATGCAAACGTTCGAGCAAAGC
TACCAGCAGCGCTGTCGGGATGGGCTTATTTCACACAGTTGCGCCCTTGCCGTTTAG
ATGGAATTGGATGAGTGGATGGTGCGTAGTGTAAAACATAATGCCTCGGATCTGCACCTTTGTAGCGGCCACCCTCCGGT
GCTACGAGTGGATGGGCGGCTACAGCCTGAAAATACCTTACCACGTTTAACGCCGGAGCAGGTGGCGCAATGGTGCAATG
CCTGGCTCGAACCCGCGCAGCGAGAGCAACTGCGGCAGTTTGGTCAGGTGGACGGCGCGTTAATGCTGCCCGATGGGCAA
CGTCTGCGGGTGAATGTGTTTCGCCAGCGGGAAGGGCTGTCTGCGGCGCTGCGTATTATTCCGTCGGCTCAGCCTTCATT
GGACGGGCTACAGGCGCCACCCGTTCTGTCGATGCTGCTGGAGAAACCGAACGGACTGATCCTGATTACTGGTGCGACGG
GGAGCGGCAAGTCCACGACGCTGGCAGCCATGATCGGGGCGTTAAACGACAGCAGCGATCGCCATGTGATTACGCTGGAG
GATCCGATCGAGTTTATCCATGTCAGCCGGCGTTGCCTGATTCAACAGCGAGAGATCGGTGCACACAGCGCGTCTTTTGC
GCAGGCGTTACGGGCGGCATTGCGGGAAGATCCCGATGTGATTCTGCTGGGGGAACTTCGTGATACGGAGACGATTCGGC
TGGCGCTGACGGCGGCGGAAACCGGCCATCTGGTGTTATCTACGCTGCATACACGCAGCGCATCGCAGGCGGTCGATCGT
CTGATTGACGTCTTTCCCGGTGAAGAAAAAGCCTATGTTCGCAGCCAGCTCGCCACCTGTTTGCAGGCCGTGGTGACGCA
AAGGCTGTTGCCTGCAGCGCAAGGCGGCCGCATTGCGCTTTATGAAGTGCTGACGGCGACTGCGGCGGTCAGCAACCTGA
TTCGGGAAGGGAAAACGCATCAGCTTCCCGGCCTGATTCAAACGGGAACGGCGGCGGGAATGCAAACGTTCGAGCAAAGC
TACCAGCAGCGCTGTCGGGATGGGCTTATTTCACACAGTTGCGCCCTTGCCGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.