Detailed information NTG0889144

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RWU16_RS09985
• Genome accession: NZ_CP136167
• Coordinates: 2123734..2124435 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain ABO21-A061
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2118734..2129435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RWU16_RS09955 (RWU16_09955)	-	2119040..2119483 (-)	444	WP_001246675.1	SRPBCC family protein	-
RWU16_RS09960 (RWU16_09960)	tadA	2119553..2120056 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
RWU16_RS09965 (RWU16_09965)	-	2120063..2121187 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RWU16_RS09970 (RWU16_09970)	ung	2121184..2121897 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
RWU16_RS09975 (RWU16_09975)	-	2121948..2122544 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
RWU16_RS09980 (RWU16_09980)	gspK	2122775..2123734 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
RWU16_RS09985 (RWU16_09985)	xcpW	2123734..2124435 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RWU16_RS09990 (RWU16_09990)	xcpV	2124435..2124815 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
RWU16_RS09995 (RWU16_09995)	-	2124805..2125359 (-)	555	WP_000841373.1	type II secretion system protein	-
RWU16_RS10000 (RWU16_10000)	-	2125369..2125977 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RWU16_RS10005 (RWU16_10005)	-	2126015..2126788 (-)	774	WP_000497298.1	TatD family hydrolase	-
RWU16_RS10010 (RWU16_10010)	-	2126806..2127147 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
RWU16_RS10015 (RWU16_10015)	-	2127159..2128139 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
RWU16_RS10020 (RWU16_10020)	kdsB	2128151..2128912 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=889144 RWU16_RS09985 WP_000594589.1 2123734..2124435(-) (xcpW) [Acinetobacter baumannii strain ABO21-A061]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=889144 RWU16_RS09985 WP_000594589.1 2123734..2124435(-) (xcpW) [Acinetobacter baumannii strain ABO21-A061]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996