Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | QU599_RS04975 | Genome accession | NZ_CP133017 |
| Coordinates | 1091453..1092502 (-) | Length | 349 a.a. |
| NCBI ID | WP_308637908.1 | Uniprot ID | - |
| Organism | Paenibacillus silvisoli strain TW38 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1086453..1097502
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QU599_RS04950 | - | 1086765..1087412 (-) | 648 | WP_308637903.1 | type 4a pilus biogenesis protein PilO | - |
| QU599_RS04955 | pilM | 1087396..1088919 (-) | 1524 | WP_308637904.1 | pilus assembly protein PilM | - |
| QU599_RS04960 | - | 1088937..1089692 (-) | 756 | WP_308637905.1 | prepilin peptidase | - |
| QU599_RS04965 | - | 1089768..1090211 (-) | 444 | WP_308637906.1 | type II secretion system protein | - |
| QU599_RS04970 | - | 1090245..1091453 (-) | 1209 | WP_308637907.1 | type II secretion system F family protein | - |
| QU599_RS04975 | pilT | 1091453..1092502 (-) | 1050 | WP_308637908.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| QU599_RS04980 | - | 1092522..1094189 (-) | 1668 | WP_308637909.1 | ATPase, T2SS/T4P/T4SS family | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 37989.44 Da Isoelectric Point: 7.3838
>NTDB_id=871334 QU599_RS04975 WP_308637908.1 1091453..1092502(-) (pilT) [Paenibacillus silvisoli strain TW38]
MTQPLELITNLLRQAHESKASDLHISVGSPPVMRVHGTLQRIGEQAVTFELSKAMATALLNEAQLTHFEQAGEVDFSYEL
EGYSRYRINAYRQRGRVSIAIRTIPTRIPSLEQLQLPAVIETLATKHQGLVLVTGPTGSGKSSTLAAMLDFINRTQKKHI
VTLEDPIEFLHTHAASVVDQREVGNDTKSFSNGLRAALRQDPDVILVGEMRDLETISAAVTAAETGHLVFATLHTTDAPQ
TIDRIIDAFPSHQQGQIRTQLAAVLLGVISQRLLPRPGGQGRTCATEIMINTPAVANLIRTEKIHQIKSVMQTGRALGMH
TLDASIKELLQSGRVDPAAARAYLTEGAG
MTQPLELITNLLRQAHESKASDLHISVGSPPVMRVHGTLQRIGEQAVTFELSKAMATALLNEAQLTHFEQAGEVDFSYEL
EGYSRYRINAYRQRGRVSIAIRTIPTRIPSLEQLQLPAVIETLATKHQGLVLVTGPTGSGKSSTLAAMLDFINRTQKKHI
VTLEDPIEFLHTHAASVVDQREVGNDTKSFSNGLRAALRQDPDVILVGEMRDLETISAAVTAAETGHLVFATLHTTDAPQ
TIDRIIDAFPSHQQGQIRTQLAAVLLGVISQRLLPRPGGQGRTCATEIMINTPAVANLIRTEKIHQIKSVMQTGRALGMH
TLDASIKELLQSGRVDPAAARAYLTEGAG
Nucleotide
Download Length: 1050 bp
>NTDB_id=871334 QU599_RS04975 WP_308637908.1 1091453..1092502(-) (pilT) [Paenibacillus silvisoli strain TW38]
ATGACACAACCATTGGAACTAATTACGAATCTACTGCGGCAAGCTCACGAGAGCAAAGCGTCCGACCTTCATATTTCCGT
AGGCTCGCCTCCTGTTATGCGGGTACACGGCACGCTTCAGCGAATCGGAGAACAAGCCGTTACGTTTGAGCTATCGAAAG
CGATGGCAACGGCGTTATTGAACGAAGCTCAACTGACTCACTTTGAACAGGCCGGCGAAGTCGATTTCTCGTACGAGCTC
GAAGGATACTCGAGATACCGGATCAATGCGTACCGCCAGCGCGGCAGAGTCAGCATCGCCATCCGGACGATACCGACACG
AATTCCGTCTTTGGAGCAGCTTCAACTGCCCGCAGTGATTGAGACGCTTGCCACAAAGCATCAAGGCCTCGTCCTAGTGA
CCGGACCTACCGGCAGCGGTAAATCTTCAACATTGGCAGCTATGCTCGATTTCATTAACCGGACTCAGAAGAAGCACATC
GTGACACTGGAGGATCCGATTGAATTTTTGCATACCCACGCCGCTTCGGTCGTCGATCAACGCGAGGTCGGCAATGACAC
GAAGAGCTTCAGCAACGGTCTGCGGGCTGCGCTCCGTCAAGATCCGGACGTCATTCTTGTCGGCGAGATGCGGGACCTGG
AAACGATCTCGGCAGCTGTAACGGCAGCCGAAACAGGCCACTTGGTTTTTGCAACTTTACATACGACGGATGCGCCGCAA
ACGATTGACCGGATCATCGACGCGTTCCCTTCGCACCAGCAAGGGCAGATCCGGACACAGCTTGCCGCCGTCCTGCTTGG
CGTCATCTCGCAGCGTCTGCTTCCAAGACCGGGCGGACAAGGCAGAACGTGCGCCACGGAAATTATGATTAATACGCCGG
CTGTCGCGAACCTGATCCGCACCGAGAAGATTCATCAAATCAAGAGCGTCATGCAGACTGGCCGGGCGCTGGGCATGCAC
ACGCTAGATGCCTCGATCAAGGAGCTTTTGCAATCCGGACGAGTCGATCCGGCTGCGGCTAGAGCTTACTTGACTGAAGG
TGCGGGCTAA
ATGACACAACCATTGGAACTAATTACGAATCTACTGCGGCAAGCTCACGAGAGCAAAGCGTCCGACCTTCATATTTCCGT
AGGCTCGCCTCCTGTTATGCGGGTACACGGCACGCTTCAGCGAATCGGAGAACAAGCCGTTACGTTTGAGCTATCGAAAG
CGATGGCAACGGCGTTATTGAACGAAGCTCAACTGACTCACTTTGAACAGGCCGGCGAAGTCGATTTCTCGTACGAGCTC
GAAGGATACTCGAGATACCGGATCAATGCGTACCGCCAGCGCGGCAGAGTCAGCATCGCCATCCGGACGATACCGACACG
AATTCCGTCTTTGGAGCAGCTTCAACTGCCCGCAGTGATTGAGACGCTTGCCACAAAGCATCAAGGCCTCGTCCTAGTGA
CCGGACCTACCGGCAGCGGTAAATCTTCAACATTGGCAGCTATGCTCGATTTCATTAACCGGACTCAGAAGAAGCACATC
GTGACACTGGAGGATCCGATTGAATTTTTGCATACCCACGCCGCTTCGGTCGTCGATCAACGCGAGGTCGGCAATGACAC
GAAGAGCTTCAGCAACGGTCTGCGGGCTGCGCTCCGTCAAGATCCGGACGTCATTCTTGTCGGCGAGATGCGGGACCTGG
AAACGATCTCGGCAGCTGTAACGGCAGCCGAAACAGGCCACTTGGTTTTTGCAACTTTACATACGACGGATGCGCCGCAA
ACGATTGACCGGATCATCGACGCGTTCCCTTCGCACCAGCAAGGGCAGATCCGGACACAGCTTGCCGCCGTCCTGCTTGG
CGTCATCTCGCAGCGTCTGCTTCCAAGACCGGGCGGACAAGGCAGAACGTGCGCCACGGAAATTATGATTAATACGCCGG
CTGTCGCGAACCTGATCCGCACCGAGAAGATTCATCAAATCAAGAGCGTCATGCAGACTGGCCGGGCGCTGGGCATGCAC
ACGCTAGATGCCTCGATCAAGGAGCTTTTGCAATCCGGACGAGTCGATCCGGCTGCGGCTAGAGCTTACTTGACTGAAGG
TGCGGGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria meningitidis 8013 |
51.94 |
95.989 |
0.499 |
| pilT | Neisseria gonorrhoeae MS11 |
51.94 |
95.989 |
0.499 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.778 |
92.837 |
0.49 |
| pilT | Vibrio cholerae strain A1552 |
51.672 |
94.269 |
0.487 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
51.672 |
94.269 |
0.487 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.898 |
95.702 |
0.487 |
| pilT | Acinetobacter baylyi ADP1 |
50.448 |
95.989 |
0.484 |
| pilT | Pseudomonas aeruginosa PAK |
50.299 |
95.702 |
0.481 |
| pilT | Acinetobacter nosocomialis M2 |
49.401 |
95.702 |
0.473 |
| pilT | Acinetobacter baumannii D1279779 |
49.401 |
95.702 |
0.473 |
| pilT | Acinetobacter baumannii strain A118 |
49.401 |
95.702 |
0.473 |
| pilT | Legionella pneumophila strain Lp02 |
49.08 |
93.41 |
0.458 |
| pilT | Legionella pneumophila strain ERS1305867 |
49.08 |
93.41 |
0.458 |
| pilU | Pseudomonas stutzeri DSM 10701 |
42.462 |
93.123 |
0.395 |
| pilU | Vibrio cholerae strain A1552 |
43.218 |
90.831 |
0.393 |
| pilU | Acinetobacter baylyi ADP1 |
39.521 |
95.702 |
0.378 |