Detailed information NTG0845068

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: V2197_RS12480
• Genome accession: NZ_CP143901
• Coordinates: 2633463..2634488 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain PA12_L1_25.22_ST207
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2628463..2639488

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V2197_RS12455 (V2197_12455)	aroE	2628665..2629489 (-)	825	WP_003097314.1	shikimate dehydrogenase	-
V2197_RS12460 (V2197_12460)	hemF	2629547..2630464 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
V2197_RS12465 (V2197_12465)	-	2630655..2631632 (+)	978	WP_003097303.1	NADPH:quinone reductase	-
V2197_RS12470 (V2197_12470)	-	2631642..2632199 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
V2197_RS12475 (V2197_12475)	dprA	2632240..2633328 (-)	1089	WP_023092225.1	DNA-processing protein DprA	Machinery gene
V2197_RS12480 (V2197_12480)	tsaP	2633463..2634488 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
V2197_RS12485 (V2197_12485)	def	2634627..2635133 (+)	507	WP_003097293.1	peptide deformylase	-
V2197_RS12490 (V2197_12490)	fmt	2635188..2636132 (+)	945	WP_009316076.1	methionyl-tRNA formyltransferase	-
V2197_RS12495 (V2197_12495)	rsmB	2636129..2637433 (+)	1305	WP_023092224.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
V2197_RS12500 (V2197_12500)	trkA	2637460..2638833 (+)	1374	WP_003111375.1	Trk system potassium transporter TrkA	-
V2197_RS12505 (V2197_12505)	-	2638982..2639299 (+)	318	WP_003097288.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=845068 V2197_RS12480 WP_003097294.1 2633463..2634488(-) (tsaP) [Pseudomonas aeruginosa strain PA12_L1_25.22_ST207]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=845068 V2197_RS12480 WP_003097294.1 2633463..2634488(-) (tsaP) [Pseudomonas aeruginosa strain PA12_L1_25.22_ST207]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCTATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393