Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | R5Y33_RS09405 | Genome accession | NZ_CP137531 |
| Coordinates | 1897406..1898449 (-) | Length | 347 a.a. |
| NCBI ID | WP_002234426.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain EXNM741 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1892406..1903449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R5Y33_RS09395 | yccS | 1893581..1895731 (-) | 2151 | WP_042744673.1 | YccS family putative transporter | - |
| R5Y33_RS09400 | pilU | 1896017..1897243 (-) | 1227 | WP_002218483.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| R5Y33_RS09405 | pilT | 1897406..1898449 (-) | 1044 | WP_002234426.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| R5Y33_RS09410 | - | 1898569..1899273 (+) | 705 | WP_002234427.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| R5Y33_RS09415 | - | 1899255..1899662 (+) | 408 | WP_025459756.1 | hypothetical protein | - |
| R5Y33_RS09420 | proC | 1899711..1900502 (+) | 792 | WP_002234429.1 | pyrroline-5-carboxylate reductase | - |
| R5Y33_RS09425 | dksA | 1900649..1901065 (+) | 417 | WP_002231430.1 | RNA polymerase-binding protein DksA | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38035.51 Da Isoelectric Point: 7.0892
>NTDB_id=822210 R5Y33_RS09405 WP_002234426.1 1897406..1898449(-) (pilT) [Neisseria meningitidis strain EXNM741]
MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNIGRGPAAVFRTIPSTVLSLEDLKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQS
LQSLVRQGLIAPEVARRRAQNSESMSF
MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNIGRGPAAVFRTIPSTVLSLEDLKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQS
LQSLVRQGLIAPEVARRRAQNSESMSF
Nucleotide
Download Length: 1044 bp
>NTDB_id=822210 R5Y33_RS09405 WP_002234426.1 1897406..1898449(-) (pilT) [Neisseria meningitidis strain EXNM741]
ATGCAGATTACCGACTTACTCGCCTTCGGCGCCAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGATATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGTAATATGGTAACTTCGG
TGATGAACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGA
TTCCGCGTCAACGCCTTCAACATCGGCCGCGGTCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGATTTGAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTTTTGGTTACCGGCCCTACCGGTT
CGGGCAAATCGACCACGCTTGCCGCAATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAGCGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAA
CGCGCTGCGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCAGAAACCATCGGCTTGG
CGCTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCAGCAAAAACCGTCGACCGTATC
GTGGACGTATTCCCGGCGGGGGAAAAAGAAATGGTGCGCTCTATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAA
CCTGCTGAAAACGCACGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCAGGCGAGCGGTATGCAGACAATGGATCAATCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGTCGCACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
ATGCAGATTACCGACTTACTCGCCTTCGGCGCCAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGATATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGTAATATGGTAACTTCGG
TGATGAACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGA
TTCCGCGTCAACGCCTTCAACATCGGCCGCGGTCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGATTTGAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTTTTGGTTACCGGCCCTACCGGTT
CGGGCAAATCGACCACGCTTGCCGCAATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAGCGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAA
CGCGCTGCGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCAGAAACCATCGGCTTGG
CGCTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCAGCAAAAACCGTCGACCGTATC
GTGGACGTATTCCCGGCGGGGGAAAAAGAAATGGTGCGCTCTATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAA
CCTGCTGAAAACGCACGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCAGGCGAGCGGTATGCAGACAATGGATCAATCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGTCGCACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria meningitidis 8013 |
99.712 |
100 |
0.997 |
| pilT | Neisseria gonorrhoeae MS11 |
98.847 |
100 |
0.988 |
| pilT | Acinetobacter baumannii D1279779 |
68.406 |
99.424 |
0.68 |
| pilT | Acinetobacter baumannii strain A118 |
68.406 |
99.424 |
0.68 |
| pilT | Acinetobacter nosocomialis M2 |
68.406 |
99.424 |
0.68 |
| pilT | Pseudomonas stutzeri DSM 10701 |
67.536 |
99.424 |
0.671 |
| pilT | Acinetobacter baylyi ADP1 |
67.246 |
99.424 |
0.669 |
| pilT | Pseudomonas aeruginosa PAK |
66.377 |
99.424 |
0.66 |
| pilT | Legionella pneumophila strain Lp02 |
65.103 |
98.271 |
0.64 |
| pilT | Legionella pneumophila strain ERS1305867 |
65.103 |
98.271 |
0.64 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
64.545 |
95.101 |
0.614 |
| pilT | Vibrio cholerae strain A1552 |
64.545 |
95.101 |
0.614 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.353 |
98.847 |
0.527 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.58 |
99.424 |
0.403 |
| pilU | Acinetobacter baylyi ADP1 |
38.728 |
99.712 |
0.386 |
| pilU | Vibrio cholerae strain A1552 |
39.692 |
93.66 |
0.372 |