Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | R5Y34_RS10620 | Genome accession | NZ_CP137530 |
| Coordinates | 2125308..2126351 (-) | Length | 347 a.a. |
| NCBI ID | WP_002226887.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain EXNM678 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2120308..2131351
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R5Y34_RS10610 | yccS | 2121483..2123633 (-) | 2151 | WP_154074399.1 | YccS family putative transporter | - |
| R5Y34_RS10615 | pilU | 2123919..2125145 (-) | 1227 | WP_002218483.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| R5Y34_RS10620 | pilT | 2125308..2126351 (-) | 1044 | WP_002226887.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| R5Y34_RS10625 | - | 2126471..2127157 (+) | 687 | WP_002239404.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| R5Y34_RS10630 | - | 2127157..2127564 (+) | 408 | WP_002221801.1 | hypothetical protein | - |
| R5Y34_RS10635 | proC | 2127613..2128404 (+) | 792 | WP_002235606.1 | pyrroline-5-carboxylate reductase | - |
| R5Y34_RS10640 | dksA | 2128551..2128967 (+) | 417 | WP_002231430.1 | RNA polymerase-binding protein DksA | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38037.48 Da Isoelectric Point: 7.0893
>NTDB_id=822147 R5Y34_RS10620 WP_002226887.1 2125308..2126351(-) (pilT) [Neisseria meningitidis strain EXNM678]
MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQS
LQSLVRQGLIAPEVARRRAQNSESMSF
MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQS
LQSLVRQGLIAPEVARRRAQNSESMSF
Nucleotide
Download Length: 1044 bp
>NTDB_id=822147 R5Y34_RS10620 WP_002226887.1 2125308..2126351(-) (pilT) [Neisseria meningitidis strain EXNM678]
ATGCAGATTACCGACTTACTCGCCTTCGGCGCTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGATATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGTAATATGGTAACTTCGG
TGATGAACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGA
TTCCGCGTCAACGCCTTCAACACCGGCCGCGGTCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGAATTGAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTATTGGTTACCGGCCCTACCGGTT
CGGGCAAATCGACCACGCTTGCCGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAGCGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAA
CGCGCTGCGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCAGAAACCATTGGCTTGG
CACTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCAGCAAAAACCGTCGACCGTATT
GTGGACGTATTCCCGGCGGGAGAAAAAGAAATGGTGCGCTCTATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAA
CCTGCTGAAAACGCACGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCAGGCGAGCGGTATGCAGACAATGGACCAATCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGTCGCACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
ATGCAGATTACCGACTTACTCGCCTTCGGCGCTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGATATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGTAATATGGTAACTTCGG
TGATGAACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGA
TTCCGCGTCAACGCCTTCAACACCGGCCGCGGTCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGAATTGAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTATTGGTTACCGGCCCTACCGGTT
CGGGCAAATCGACCACGCTTGCCGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAGCGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAA
CGCGCTGCGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCAGAAACCATTGGCTTGG
CACTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCAGCAAAAACCGTCGACCGTATT
GTGGACGTATTCCCGGCGGGAGAAAAAGAAATGGTGCGCTCTATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAA
CCTGCTGAAAACGCACGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCAGGCGAGCGGTATGCAGACAATGGACCAATCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGTCGCACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria meningitidis 8013 |
99.712 |
100 |
0.997 |
| pilT | Neisseria gonorrhoeae MS11 |
99.424 |
100 |
0.994 |
| pilT | Acinetobacter baumannii D1279779 |
68.116 |
99.424 |
0.677 |
| pilT | Acinetobacter baumannii strain A118 |
68.116 |
99.424 |
0.677 |
| pilT | Acinetobacter nosocomialis M2 |
68.116 |
99.424 |
0.677 |
| pilT | Acinetobacter baylyi ADP1 |
67.536 |
99.424 |
0.671 |
| pilT | Pseudomonas stutzeri DSM 10701 |
67.246 |
99.424 |
0.669 |
| pilT | Pseudomonas aeruginosa PAK |
66.667 |
99.424 |
0.663 |
| pilT | Legionella pneumophila strain Lp02 |
64.809 |
98.271 |
0.637 |
| pilT | Legionella pneumophila strain ERS1305867 |
64.809 |
98.271 |
0.637 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
64.545 |
95.101 |
0.614 |
| pilT | Vibrio cholerae strain A1552 |
64.545 |
95.101 |
0.614 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.687 |
97.695 |
0.524 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.29 |
99.424 |
0.401 |
| pilU | Vibrio cholerae strain A1552 |
38.329 |
100 |
0.383 |
| pilU | Acinetobacter baylyi ADP1 |
38.439 |
99.712 |
0.383 |