Detailed information NTG0804744

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PYS58_RS16625
• Genome accession: NZ_CP120209
• Coordinates: 3635451..3636560 (-)
• Length: 369 a.a.
• NCBI ID: WP_276283458.1
• Uniprot ID: -
• Organism: Chryseobacterium indologenes strain Ery-6B
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3630451..3641560

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYS58_RS16595 (PYS58_16595)	-	3630799..3631179 (-)	381	WP_185246224.1	group III truncated hemoglobin	-
PYS58_RS16600 (PYS58_16600)	-	3631325..3632296 (+)	972	WP_185246223.1	ion channel	-
PYS58_RS16605 (PYS58_16605)	-	3632297..3632785 (+)	489	WP_276283457.1	YkgJ family cysteine cluster protein	-
PYS58_RS16610 (PYS58_16610)	-	3633041..3633355 (+)	315	WP_185246221.1	hypothetical protein	-
PYS58_RS16615 (PYS58_16615)	-	3633405..3633773 (-)	369	WP_185246220.1	DUF1801 domain-containing protein	-
PYS58_RS16620 (PYS58_16620)	gdhA	3633902..3635260 (-)	1359	WP_101238650.1	NADP-specific glutamate dehydrogenase	-
PYS58_RS16625 (PYS58_16625)	dprA	3635451..3636560 (-)	1110	WP_276283458.1	DNA-processing protein DprA	Machinery gene
PYS58_RS16630 (PYS58_16630)	-	3636594..3637361 (-)	768	WP_276283459.1	rhomboid family intramembrane serine protease	-
PYS58_RS16635 (PYS58_16635)	-	3637611..3638537 (+)	927	WP_185246217.1	DUF3078 domain-containing protein	-
PYS58_RS16640 (PYS58_16640)	-	3638756..3639679 (+)	924	WP_185246216.1	DUF3078 domain-containing protein	-
PYS58_RS16645 (PYS58_16645)	sufD	3639747..3641054 (-)	1308	WP_185246509.1	Fe-S cluster assembly protein SufD	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41434.17 Da
• Isoelectric Point: 7.0218

>NTDB_id=804744 PYS58_RS16625 WP_276283458.1 3635451..3636560(-) (dprA) [Chryseobacterium indologenes strain Ery-6B]
MISEEYLYAIALRESSQIGDINFHKLVKTFGNAENAWKKAKREYKKLEGIGQKTVADIGNESHLKFAEKELSFCEKNNIR
IRLRHLDETPSLLNECIDAPAILYQKGNTNESLQKISIVGTRTMTSYGKQFITDFFEATQSLQYASVSGLALGIDKEVHE
QSIRNQKPTIAVLAHGFDFLYPAQNRKLSEKILQEGGILLTEFNSTRKPDRENFIQRNRIVAGLSPSTIVVETGFGGGSV
STAAFANDYNREVFALPGRITDIHSQGCNQLILHNKATAISTIKDLISMLGFHNPKEKIAELFPHSEITIQFTDSQENIY
QFIKQNPQISLDDLAQEIDLSSHKILPIILELELLGKVKSFSGRQFIAN

Nucleotide

• Length: 1110 bp

>NTDB_id=804744 PYS58_RS16625 WP_276283458.1 3635451..3636560(-) (dprA) [Chryseobacterium indologenes strain Ery-6B]
ATGATCTCCGAAGAATATTTATATGCCATTGCATTGCGCGAAAGCAGCCAGATTGGTGATATTAATTTCCATAAACTTGT
AAAAACCTTTGGAAATGCAGAAAATGCATGGAAAAAAGCAAAGAGAGAATACAAAAAACTGGAAGGTATTGGGCAAAAAA
CAGTTGCCGATATTGGAAATGAAAGTCATCTGAAATTTGCAGAAAAGGAACTGTCATTTTGTGAAAAAAATAATATCCGG
ATCAGGTTAAGGCATCTTGATGAAACTCCTTCTCTTCTTAATGAATGCATAGATGCGCCTGCCATTTTATACCAAAAAGG
AAATACTAATGAATCGCTTCAGAAGATAAGCATTGTTGGGACCCGTACTATGACTTCTTATGGAAAACAGTTTATCACAG
ATTTTTTTGAAGCTACCCAATCTTTACAATATGCTTCTGTGAGCGGTCTTGCTTTAGGAATAGATAAAGAAGTTCATGAG
CAGTCTATCCGCAATCAGAAACCCACCATAGCAGTTCTTGCCCATGGATTTGATTTTTTATATCCTGCCCAAAATAGAAA
ATTGTCAGAAAAAATTCTTCAGGAAGGTGGTATTTTATTAACCGAATTCAATTCTACCAGAAAACCGGATCGCGAAAATT
TCATTCAGAGAAATAGAATTGTAGCGGGGCTTTCTCCTTCAACCATCGTTGTGGAAACAGGATTTGGAGGTGGATCTGTA
AGCACAGCAGCTTTTGCCAATGATTATAACAGGGAGGTGTTTGCTCTACCCGGAAGGATCACAGACATTCATAGCCAGGG
CTGTAATCAATTGATTTTGCATAACAAAGCTACAGCTATTTCTACTATTAAAGATCTTATAAGCATGCTGGGTTTTCATA
ATCCAAAAGAAAAAATTGCTGAGCTATTTCCTCACAGTGAAATAACAATACAATTTACTGATAGTCAGGAAAATATTTAT
CAATTCATCAAACAAAATCCACAGATTTCTCTGGACGATCTCGCACAGGAAATTGACCTTTCTTCACATAAAATTTTACC
AATTATTTTAGAATTAGAACTTTTAGGGAAAGTAAAATCATTTTCCGGGAGGCAATTTATCGCAAATTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (313-363)

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	50.824	98.645	0.501