Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | P3K40_RS06680 | Genome accession | NZ_CP119701 |
| Coordinates | 1369421..1370395 (+) | Length | 324 a.a. |
| NCBI ID | WP_014613820.1 | Uniprot ID | - |
| Organism | Staphylococcus pseudintermedius strain CUVET17-667 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1364421..1375395
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3K40_RS06645 (P3K40_06575) | rpmG | 1364820..1364969 (+) | 150 | WP_014613813.1 | 50S ribosomal protein L33 | - |
| P3K40_RS06650 (P3K40_06580) | - | 1365121..1365660 (+) | 540 | WP_014613814.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| P3K40_RS06655 (P3K40_06585) | - | 1365679..1367118 (+) | 1440 | WP_103263428.1 | rhomboid family intramembrane serine protease | - |
| P3K40_RS06660 (P3K40_06590) | - | 1367120..1367323 (+) | 204 | WP_014613816.1 | YqgQ family protein | - |
| P3K40_RS06665 (P3K40_06595) | - | 1367320..1368306 (+) | 987 | WP_404959778.1 | ROK family glucokinase | - |
| P3K40_RS06670 (P3K40_06600) | - | 1368307..1368618 (+) | 312 | WP_014613818.1 | MTH1187 family thiamine-binding protein | - |
| P3K40_RS06675 (P3K40_06605) | - | 1368631..1369260 (+) | 630 | WP_096535719.1 | MBL fold metallo-hydrolase | - |
| P3K40_RS06680 (P3K40_06610) | comGA | 1369421..1370395 (+) | 975 | WP_014613820.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| P3K40_RS06685 (P3K40_06615) | comGB | 1370364..1371431 (+) | 1068 | WP_014613821.1 | competence type IV pilus assembly protein ComGB | - |
| P3K40_RS06690 (P3K40_06620) | comGC | 1371444..1371767 (+) | 324 | WP_015729165.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| P3K40_RS06695 (P3K40_06625) | comGD | 1371745..1372185 (+) | 441 | WP_014613823.1 | competence type IV pilus minor pilin ComGD | - |
| P3K40_RS06700 (P3K40_06630) | - | 1372257..1372490 (+) | 234 | WP_014613824.1 | hypothetical protein | - |
| P3K40_RS06705 (P3K40_06635) | - | 1372396..1372881 (+) | 486 | WP_080552896.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| P3K40_RS06710 (P3K40_06640) | - | 1373045..1373572 (+) | 528 | WP_014613826.1 | shikimate kinase | - |
| P3K40_RS06715 (P3K40_06645) | gcvT | 1373730..1374821 (+) | 1092 | WP_015729161.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36846.58 Da Isoelectric Point: 7.5584
>NTDB_id=800557 P3K40_RS06680 WP_014613820.1 1369421..1370395(+) (comGA) [Staphylococcus pseudintermedius strain CUVET17-667]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KALYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNKEGVIDEKILR
KYTI
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KALYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNKEGVIDEKILR
KYTI
Nucleotide
Download Length: 975 bp
>NTDB_id=800557 P3K40_RS06680 WP_014613820.1 1369421..1370395(+) (comGA) [Staphylococcus pseudintermedius strain CUVET17-667]
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCATCAGACATTCATTTTATCCCATCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCGCAAAGTGGGCGCTATATTTATGAACAT
AAAGCGTTATATTATTTAAGAGTGTCCACGTTACCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCTCATAGTGTATTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAGAGCACGTTAATGTATCAAATGGTCGTCTATGCTAAACAAAAGTTAAACCTGAATATT
ATCACAATAGAAGACCCGGTCGAGCAGCTTGTGAACGGCATTACGCAAATTTCCGTTAACGAAAAAGCTGATATTACGTA
TGGATCGTCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAATTGGTGAGATTCGTGACAGTCATATTGCAA
GGGACGTTATACAAGCGAGTTTAAGTGGGCATTTAGTATTGTCGACGATACACGCCAATGATTGTCAAGGGGTGCTCCTT
AGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGATTCATTACTTTTTGAATAATAACTTCCAAC
TACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAAGAGGGGGTTATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCATCAGACATTCATTTTATCCCATCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCGCAAAGTGGGCGCTATATTTATGAACAT
AAAGCGTTATATTATTTAAGAGTGTCCACGTTACCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCTCATAGTGTATTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAGAGCACGTTAATGTATCAAATGGTCGTCTATGCTAAACAAAAGTTAAACCTGAATATT
ATCACAATAGAAGACCCGGTCGAGCAGCTTGTGAACGGCATTACGCAAATTTCCGTTAACGAAAAAGCTGATATTACGTA
TGGATCGTCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAATTGGTGAGATTCGTGACAGTCATATTGCAA
GGGACGTTATACAAGCGAGTTTAAGTGGGCATTTAGTATTGTCGACGATACACGCCAATGATTGTCAAGGGGTGCTCCTT
AGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGATTCATTACTTTTTGAATAATAACTTCCAAC
TACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAAGAGGGGGTTATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.514 |
99.691 |
0.583 |
| comGA | Staphylococcus aureus N315 |
58.514 |
99.691 |
0.583 |