Detailed information NTG0774629

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: PG908_RS13980
• Genome accession: NZ_CP115957
• Coordinates: 2956030..2957073 (-)
• Length: 347 a.a.
• NCBI ID: WP_011002592.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain PSS4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2951030..2962073

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PG908_RS13950	-	2951559..2952095 (-)	537	WP_011002586.1	PilX N-terminal domain-containing pilus assembly protein	-
PG908_RS13955	-	2952099..2953127 (-)	1029	WP_016723683.1	PilW family protein	-
PG908_RS13960	pilV	2953124..2953714 (-)	591	WP_011002588.1	type IV pilus modification protein PilV	-
PG908_RS13965	-	2953711..2954199 (-)	489	WP_016723684.1	Tfp pilus assembly protein FimT/FimU	-
PG908_RS13970	-	2954203..2954643 (-)	441	WP_011002590.1	type IV pilin protein	-
PG908_RS13975	pilU	2954838..2955977 (-)	1140	WP_011002591.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
PG908_RS13980	pilT	2956030..2957073 (-)	1044	WP_011002592.1	type IV pilus twitching motility protein PilT	Machinery gene
PG908_RS13985	-	2957198..2957920 (+)	723	WP_011002593.1	YggS family pyridoxal phosphate-dependent enzyme	-
PG908_RS13990	proC	2957955..2958779 (+)	825	WP_011002594.1	pyrroline-5-carboxylate reductase	-
PG908_RS13995	-	2958801..2959079 (+)	279	WP_011002595.1	hypothetical protein	-
PG908_RS14000	ubiA	2959076..2959951 (-)	876	WP_011002596.1	4-hydroxybenzoate octaprenyltransferase	-
PG908_RS14005	-	2960025..2960525 (-)	501	WP_003271865.1	Dps family protein	-
PG908_RS14010	-	2960684..2960926 (-)	243	WP_011002597.1	hypothetical protein	-
PG908_RS14015	-	2960985..2961233 (-)	249	WP_011002598.1	hypothetical protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38150.80 Da
• Isoelectric Point: 6.8705

>NTDB_id=774629 PG908_RS13980 WP_011002592.1 2956030..2957073(-) (pilT) [Ralstonia pseudosolanacearum strain PSS4]
MDIAQLLAFAAKNKASDLHLSAGLPPMIRIHGDMRRINVPPLTHQDVHAMVYDIMSDVQRKHYEENLEADFSFEIPGLSR
FRVNAFNQNRGAAAVFRTIPSKVLTLEDLKAPAVFADLAMKPRGLVLVTGPTGSGKSTTLAAMVNHRNESDLGHILTVED
PIEFVHESKKSLINQRELGPHTHSFANALKSALREDPDVVLVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRV
VDVFPSDEKDMVRTMLSESLEAVISQTLLKTRDGSGRVAAHEIMICTPAIRHLIRENKISQMYSMMQTSSGLGMQTLDQC
LAELIKRSAINYADARAIAKNPDAFAN

Nucleotide

• Length: 1044 bp

>NTDB_id=774629 PG908_RS13980 WP_011002592.1 2956030..2957073(-) (pilT) [Ralstonia pseudosolanacearum strain PSS4]
ATGGACATCGCGCAGCTTCTGGCCTTCGCTGCCAAGAACAAAGCGTCTGATCTGCACTTGTCGGCGGGCTTGCCTCCGAT
GATCCGGATCCATGGCGACATGCGCCGTATCAACGTGCCGCCGCTCACGCACCAGGATGTCCACGCCATGGTGTACGACA
TCATGAGCGACGTGCAGCGCAAGCATTACGAAGAAAACCTGGAAGCCGACTTCTCGTTCGAGATTCCCGGGCTGTCGCGT
TTCCGGGTCAACGCCTTCAACCAGAACCGCGGTGCCGCCGCCGTGTTCCGGACGATTCCGTCCAAGGTCCTGACGCTGGA
AGACCTGAAGGCGCCGGCCGTCTTCGCCGACCTCGCCATGAAGCCGCGCGGCCTGGTGCTGGTGACGGGGCCGACCGGCT
CGGGCAAGTCGACCACGCTGGCGGCGATGGTCAATCACCGCAATGAAAGCGACCTGGGCCACATCCTCACGGTGGAGGAC
CCGATCGAATTCGTGCACGAATCCAAGAAGAGCCTGATCAACCAGCGCGAACTGGGGCCGCATACCCATTCGTTTGCCAA
CGCGCTGAAATCGGCGCTGCGGGAAGACCCGGACGTGGTCTTGGTCGGCGAATTGCGTGACCTGGAAACCATCCGCCTGG
CGCTGACCGCGGCCGAAACCGGCCACTTGGTGTTTGGCACGCTGCACACGAGTTCCGCGGCCAAGACCATCGACCGGGTG
GTCGACGTGTTCCCCTCGGATGAGAAGGACATGGTCCGCACCATGTTGTCCGAATCGCTGGAAGCGGTGATCTCGCAGAC
GCTGCTCAAGACGCGCGACGGCTCCGGCCGGGTCGCGGCGCACGAGATCATGATCTGCACGCCGGCCATCCGACACCTGA
TCCGCGAGAACAAGATCTCGCAGATGTACTCGATGATGCAGACCAGCAGCGGGCTGGGCATGCAGACGCTGGACCAGTGC
CTGGCGGAGCTCATCAAGCGCTCGGCGATCAACTACGCCGACGCGCGTGCCATCGCCAAGAACCCGGACGCGTTCGCGAA
CTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (10-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilT	Acinetobacter nosocomialis M2	71.594	99.424	0.712
pilT	Acinetobacter baumannii D1279779	71.594	99.424	0.712
pilT	Acinetobacter baumannii strain A118	71.594	99.424	0.712
pilT	Pseudomonas aeruginosa PAK	71.304	99.424	0.709
pilT	Pseudomonas stutzeri DSM 10701	71.014	99.424	0.706
pilT	Acinetobacter baylyi ADP1	69.855	99.424	0.695
pilT	Neisseria gonorrhoeae MS11	68.497	99.712	0.683
pilT	Neisseria meningitidis 8013	68.497	99.712	0.683
pilT	Legionella pneumophila strain Lp02	67.826	99.424	0.674
pilT	Legionella pneumophila strain ERS1305867	67.826	99.424	0.674
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	66.172	97.118	0.643
pilT	Vibrio cholerae strain A1552	66.172	97.118	0.643
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	50.867	99.712	0.507
pilU	Acinetobacter baylyi ADP1	42.442	99.135	0.421
pilU	Pseudomonas stutzeri DSM 10701	42.388	96.542	0.409
pilU	Vibrio cholerae strain A1552	41.791	96.542	0.403