Detailed information NTG0076445

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: H7R58_RS04330
• Genome accession: NZ_AP022057
• Coordinates: 900248..901231 (+)
• Length: 327 a.a.
• NCBI ID: WP_182930043.1
• Uniprot ID: -
• Organism: Klebsiella sp. WP4-W18-ESBL-05
• Function: type IV pilus retraction (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	901607..902110	900248..901231	flank	376

Gene organization within MGE regions

Location: 900248..902110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R58_RS04330 (WP4W18E05_08620)	pilT	900248..901231 (+)	984	WP_182930043.1	type IV pilus twitching motility protein PilT	Machinery gene

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35509.64 Da
• Isoelectric Point: 6.7351

>NTDB_id=76445 H7R58_RS04330 WP_182930043.1 900248..901231(+) (pilT) [Klebsiella sp. WP4-W18-ESBL-05]
MDIQEIVTLSVKHNVSDLHLCSSGNARWRRAGKLEIAPFSAPHLGVLMDGWLSESQQQTWLRQRQLDFSLSLTGCPRLRA
SAFAHSGGVSLVLRILPTRCPTLDELHPPVALAEMLQEESGLILVTGATGSGKSTTLAAMVDYLNHHQAGHILTLEDPVE
FLHTSEGGLIHQREVGEHAASFADALRVALRQDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAIERLVDV
FPAQEKEPVRNQLASSLCAVLAQKLQPDNRGGRVALFEMLINTPAVGNLIREGKTHQIAGVMQTGLQSGMQTFSQSYQQR
VKAGMLS

Nucleotide

• Length: 984 bp

>NTDB_id=76445 H7R58_RS04330 WP_182930043.1 900248..901231(+) (pilT) [Klebsiella sp. WP4-W18-ESBL-05]
ATGGATATACAAGAAATCGTGACGCTTAGTGTAAAGCATAACGTGTCCGATCTACACCTATGTAGCAGTGGAAACGCGCG
CTGGCGTAGGGCGGGTAAGCTGGAAATAGCGCCGTTTAGCGCCCCGCATCTCGGCGTGCTAATGGACGGCTGGCTAAGTG
AAAGCCAGCAACAGACGTGGCTGCGGCAGCGACAGCTTGATTTTTCACTGTCGCTGACCGGCTGCCCGCGCCTGCGTGCC
AGTGCGTTTGCCCACAGCGGCGGTGTCTCGCTGGTGCTGCGCATACTGCCGACGCGCTGCCCTACGCTTGACGAACTGCA
TCCGCCGGTGGCGTTAGCGGAGATGCTACAGGAGGAGAGCGGGCTGATTCTGGTGACCGGGGCGACGGGCAGCGGAAAAT
CCACCACGCTGGCGGCGATGGTGGATTACCTTAATCATCATCAGGCCGGGCATATTTTGACGCTGGAAGACCCGGTTGAG
TTTCTGCATACCAGCGAGGGGGGTCTGATTCACCAGCGCGAGGTCGGTGAGCACGCCGCGTCTTTTGCCGATGCGCTGCG
AGTCGCACTACGTCAGGATCCGGATGTGATTCTGCTGGGTGAGCTGCGCGATAGCGAAACCATTCGTCTGGCGCTGACGG
CGGCGGAAACCGGGCACCTGGTGCTGGCAACGCTGCATACGCGCGGCGCGGCACAGGCCATAGAGCGGCTGGTGGACGTG
TTCCCCGCACAGGAAAAAGAGCCCGTGCGCAATCAGCTGGCCAGCAGCCTCTGCGCGGTGCTGGCGCAAAAGCTGCAGCC
GGACAATCGCGGCGGGCGCGTCGCGCTGTTTGAAATGCTGATTAACACGCCGGCGGTGGGTAATCTCATTCGCGAAGGGA
AAACGCACCAGATAGCAGGCGTGATGCAGACCGGGTTGCAAAGCGGCATGCAGACCTTCAGCCAAAGCTATCAACAGCGA
GTTAAGGCGGGGATGTTATCGTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (10-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilT	Vibrio cholerae strain A1552	49.394	100	0.498
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	49.394	100	0.498
pilT	Neisseria meningitidis 8013	48.64	100	0.492
pilT	Neisseria gonorrhoeae MS11	48.338	100	0.489
pilT	Pseudomonas aeruginosa PAK	46.061	100	0.465
pilT	Pseudomonas stutzeri DSM 10701	45.758	100	0.462
pilT	Legionella pneumophila strain Lp02	45.758	100	0.462
pilT	Legionella pneumophila strain ERS1305867	45.758	100	0.462
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	47.634	96.942	0.462
pilT	Acinetobacter baumannii D1279779	45.455	100	0.459
pilT	Acinetobacter nosocomialis M2	45.455	100	0.459
pilT	Acinetobacter baumannii strain A118	45.455	100	0.459
pilT	Acinetobacter baylyi ADP1	45.455	100	0.459
pilU	Acinetobacter baylyi ADP1	39.938	98.777	0.394
pilU	Pseudomonas stutzeri DSM 10701	40	97.859	0.391
pilU	Vibrio cholerae strain A1552	39.198	99.083	0.388