Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | OXA86_RS11455 | Genome accession | NZ_CP113439 |
| Coordinates | 2563740..2564861 (-) | Length | 373 a.a. |
| NCBI ID | WP_014842283.1 | Uniprot ID | A0AAV2V075 |
| Organism | Legionella pneumophila strain PATHC002 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2558740..2569861
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXA86_RS11440 (OXA86_11440) | - | 2559626..2560063 (-) | 438 | WP_229295034.1 | hypothetical protein | - |
| OXA86_RS11445 (OXA86_11445) | - | 2560340..2561635 (+) | 1296 | WP_014842281.1 | serine/threonine transporter | - |
| OXA86_RS11450 (OXA86_11450) | ankK | 2561728..2563653 (-) | 1926 | WP_044497495.1 | Dot/Icm T4SS effector AnkK/LegA5 | - |
| OXA86_RS11455 (OXA86_11455) | pilU | 2563740..2564861 (-) | 1122 | WP_014842283.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| OXA86_RS11460 (OXA86_11460) | - | 2564951..2566879 (-) | 1929 | WP_044497496.1 | FAD-binding oxidoreductase | - |
| OXA86_RS11465 (OXA86_11465) | - | 2566904..2567734 (-) | 831 | WP_027220503.1 | phytanoyl-CoA dioxygenase family protein | - |
| OXA86_RS11470 (OXA86_11470) | radA | 2567731..2569086 (-) | 1356 | WP_027220504.1 | DNA repair protein RadA | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41732.03 Da Isoelectric Point: 5.4724
>NTDB_id=762251 OXA86_RS11455 WP_014842283.1 2563740..2564861(-) (pilU) [Legionella pneumophila strain PATHC002]
MDITPFFKLMVDKGASDLFFSVGAPPNIKIEGITSPIGQVPIKSNQMAEIVLSIMNDAQQKEFESKMELNMAFSLAGVGR
FRINLFRQRGEVAMVVRYIKGEIPSIEDLNLPQILKSLVLELRGLVLVVGSTGSGKSTTLATMINHRNENHRGHILTIED
PIEYIHQHKKSIVDQREIGIDTLSYDNALKNAMREAPDVILIGEIRDLNSMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPDEARQQILLDLSLNLKAIISLRLIPGVDNQRVAAVEILINSPYISDLIEKGKIDDIKEVMARSTEQGMQTFDQAL
FNLYKEGKITKENAIKYADSKNNVGLQIRLGEEKSFNIQDENLQIQPDDIDKV
MDITPFFKLMVDKGASDLFFSVGAPPNIKIEGITSPIGQVPIKSNQMAEIVLSIMNDAQQKEFESKMELNMAFSLAGVGR
FRINLFRQRGEVAMVVRYIKGEIPSIEDLNLPQILKSLVLELRGLVLVVGSTGSGKSTTLATMINHRNENHRGHILTIED
PIEYIHQHKKSIVDQREIGIDTLSYDNALKNAMREAPDVILIGEIRDLNSMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPDEARQQILLDLSLNLKAIISLRLIPGVDNQRVAAVEILINSPYISDLIEKGKIDDIKEVMARSTEQGMQTFDQAL
FNLYKEGKITKENAIKYADSKNNVGLQIRLGEEKSFNIQDENLQIQPDDIDKV
Nucleotide
Download Length: 1122 bp
>NTDB_id=762251 OXA86_RS11455 WP_014842283.1 2563740..2564861(-) (pilU) [Legionella pneumophila strain PATHC002]
ATGGATATTACTCCTTTTTTTAAGCTCATGGTCGATAAAGGTGCCTCAGATTTGTTTTTCAGTGTCGGGGCACCACCAAA
TATTAAAATCGAGGGCATCACATCACCTATTGGCCAGGTTCCTATCAAATCGAATCAAATGGCAGAAATTGTTTTATCTA
TTATGAATGACGCACAGCAAAAAGAATTTGAGTCTAAAATGGAACTCAATATGGCTTTTTCATTAGCTGGAGTAGGGCGT
TTCCGAATCAATTTATTCAGGCAACGTGGCGAAGTGGCTATGGTGGTGCGTTACATCAAGGGCGAAATACCTTCTATAGA
AGATTTAAATCTTCCTCAAATTTTAAAGTCTCTGGTCTTGGAGTTGCGAGGTTTAGTATTGGTTGTTGGGTCCACGGGAT
CTGGTAAATCAACAACTCTGGCCACGATGATCAACCACCGTAATGAAAATCACAGAGGGCATATTTTAACAATAGAGGAT
CCTATTGAATATATACATCAACATAAAAAATCAATAGTTGATCAACGAGAGATAGGTATTGATACTCTAAGCTATGACAA
TGCATTGAAAAACGCAATGAGAGAAGCGCCTGATGTGATATTAATTGGTGAAATTCGTGATCTTAACTCAATGAAACATG
CGATAGCTTATGCTGAAACAGGACATTTGTGCATTTCTACTTTGCATGCCAATAACGCCAATCAGGCTCTAGATAGAGTG
ATTAATTTTTTCCCCGATGAGGCAAGACAACAGATATTATTAGATTTATCTCTTAATTTAAAAGCAATCATTTCATTACG
TTTGATACCAGGAGTTGATAATCAACGTGTCGCAGCGGTGGAGATCTTGATTAACTCTCCTTACATTTCCGATTTGATTG
AAAAAGGGAAGATAGACGATATTAAAGAAGTCATGGCAAGAAGCACGGAACAAGGCATGCAGACTTTCGATCAGGCTTTA
TTTAATTTATATAAAGAAGGAAAAATTACCAAAGAAAATGCGATTAAGTATGCTGATTCAAAAAACAATGTGGGTTTACA
AATTCGATTGGGCGAAGAAAAAAGCTTTAATATTCAAGATGAGAATTTACAAATACAACCCGATGATATTGACAAGGTAT
GA
ATGGATATTACTCCTTTTTTTAAGCTCATGGTCGATAAAGGTGCCTCAGATTTGTTTTTCAGTGTCGGGGCACCACCAAA
TATTAAAATCGAGGGCATCACATCACCTATTGGCCAGGTTCCTATCAAATCGAATCAAATGGCAGAAATTGTTTTATCTA
TTATGAATGACGCACAGCAAAAAGAATTTGAGTCTAAAATGGAACTCAATATGGCTTTTTCATTAGCTGGAGTAGGGCGT
TTCCGAATCAATTTATTCAGGCAACGTGGCGAAGTGGCTATGGTGGTGCGTTACATCAAGGGCGAAATACCTTCTATAGA
AGATTTAAATCTTCCTCAAATTTTAAAGTCTCTGGTCTTGGAGTTGCGAGGTTTAGTATTGGTTGTTGGGTCCACGGGAT
CTGGTAAATCAACAACTCTGGCCACGATGATCAACCACCGTAATGAAAATCACAGAGGGCATATTTTAACAATAGAGGAT
CCTATTGAATATATACATCAACATAAAAAATCAATAGTTGATCAACGAGAGATAGGTATTGATACTCTAAGCTATGACAA
TGCATTGAAAAACGCAATGAGAGAAGCGCCTGATGTGATATTAATTGGTGAAATTCGTGATCTTAACTCAATGAAACATG
CGATAGCTTATGCTGAAACAGGACATTTGTGCATTTCTACTTTGCATGCCAATAACGCCAATCAGGCTCTAGATAGAGTG
ATTAATTTTTTCCCCGATGAGGCAAGACAACAGATATTATTAGATTTATCTCTTAATTTAAAAGCAATCATTTCATTACG
TTTGATACCAGGAGTTGATAATCAACGTGTCGCAGCGGTGGAGATCTTGATTAACTCTCCTTACATTTCCGATTTGATTG
AAAAAGGGAAGATAGACGATATTAAAGAAGTCATGGCAAGAAGCACGGAACAAGGCATGCAGACTTTCGATCAGGCTTTA
TTTAATTTATATAAAGAAGGAAAAATTACCAAAGAAAATGCGATTAAGTATGCTGATTCAAAAAACAATGTGGGTTTACA
AATTCGATTGGGCGAAGAAAAAAGCTTTAATATTCAAGATGAGAATTTACAAATACAACCCGATGATATTGACAAGGTAT
GA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
55.085 |
94.906 |
0.523 |
| pilU | Acinetobacter baylyi ADP1 |
52.958 |
95.174 |
0.504 |
| pilU | Vibrio cholerae strain A1552 |
48 |
93.834 |
0.45 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.428 |
90.885 |
0.413 |
| pilT | Legionella pneumophila strain ERS1305867 |
42.982 |
91.689 |
0.394 |
| pilT | Legionella pneumophila strain Lp02 |
42.982 |
91.689 |
0.394 |
| pilT | Neisseria meningitidis 8013 |
42.075 |
93.029 |
0.391 |
| pilT | Neisseria gonorrhoeae MS11 |
42.075 |
93.029 |
0.391 |
| pilT | Pseudomonas aeruginosa PAK |
42.274 |
91.957 |
0.389 |
| pilT | Pseudomonas stutzeri DSM 10701 |
41.691 |
91.957 |
0.383 |
| pilT | Acinetobacter baumannii strain A118 |
42.814 |
89.544 |
0.383 |
| pilT | Acinetobacter nosocomialis M2 |
42.814 |
89.544 |
0.383 |
| pilT | Acinetobacter baumannii D1279779 |
42.814 |
89.544 |
0.383 |
| pilT | Acinetobacter baylyi ADP1 |
40.588 |
91.153 |
0.37 |
| pilT | Vibrio cholerae strain A1552 |
41.641 |
88.204 |
0.367 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.641 |
88.204 |
0.367 |