Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   OSV63_RS10915 Genome accession   NZ_CP113078
Coordinates   2211057..2212187 (-) Length   376 a.a.
NCBI ID   WP_001991425.1    Uniprot ID   A0A0J1A8J0
Organism   Acinetobacter baumannii strain AB5075     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2206057..2217187
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV63_RS10890 (OSV63_10890) - 2206232..2206996 (-) 765 WP_000786955.1 AraC family transcriptional regulator -
  OSV63_RS10895 (OSV63_10895) - 2207018..2208232 (-) 1215 WP_000372838.1 MFS transporter -
  OSV63_RS10900 (OSV63_10900) - 2208369..2209019 (+) 651 WP_012300783.1 TetR/AcrR family transcriptional regulator -
  OSV63_RS10905 (OSV63_10905) - 2209125..2210045 (+) 921 WP_001994180.1 DMT family transporter -
  OSV63_RS10910 (OSV63_10910) - 2210437..2211006 (-) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  OSV63_RS10915 (OSV63_10915) dprA 2211057..2212187 (-) 1131 WP_001991425.1 DNA-processing protein DprA Machinery gene
  OSV63_RS10920 (OSV63_10920) tsaP 2212208..2213362 (-) 1155 WP_000755285.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  OSV63_RS10925 (OSV63_10925) def 2213485..2214015 (+) 531 WP_001196539.1 peptide deformylase -
  OSV63_RS10930 (OSV63_10930) - 2214052..2214480 (+) 429 WP_000231981.1 DUF2946 family protein -
  OSV63_RS10935 (OSV63_10935) - 2214553..2216667 (+) 2115 WP_001120674.1 TonB-dependent copper receptor -
  OSV63_RS10940 (OSV63_10940) - 2216721..2216927 (+) 207 WP_000182542.1 hypothetical protein -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41843.48 Da        Isoelectric Point: 6.7530

>NTDB_id=760013 OSV63_RS10915 WP_001991425.1 2211057..2212187(-) (dprA) [Acinetobacter baumannii strain AB5075]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVSEFQTPQGQTQFEQLVQQV
VQHTDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQKQTKEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVIHHNVPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=760013 OSV63_RS10915 WP_001991425.1 2211057..2212187(-) (dprA) [Acinetobacter baumannii strain AB5075]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGACTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTAGGGCTAC
ATGCTAATCACTTAAAACGTGTAAGTGAGTTTCAAACGCCCCAAGGTCAGACGCAGTTTGAACAACTTGTACAACAAGTT
GTTCAACATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATCATCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGTCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGCGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTGCTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAATGGCGCCATTATTACGGAGTTTTTACCGGGTACAC
CACCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGCGGCTCACTCATCACGGCCAATAAAGCTGCAGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAAACAAACTAAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGATCTTTATCAGTCTTTAGACTGGGTAGGACAAAATATTGACCAGCTTGTAATTCATCATAATGTGCC
GGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0J1A8J0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

97.34

100

0.973

  dprA Acinetobacter baumannii strain A118

97.074

100

0.971

  dprA Acinetobacter baylyi ADP1

70.942

100

0.721

  dprA Vibrio cholerae strain A1552

43.243

88.564

0.383