Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | LDO80_RS08570 | Genome accession | NZ_AP024933 |
| Coordinates | 1595720..1596187 (-) | Length | 155 a.a. |
| NCBI ID | WP_143586369.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain AA3-7 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1590720..1601187
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO80_RS08545 (TthAA37_16960) | - | 1590927..1591340 (+) | 414 | WP_143586361.1 | PaaI family thioesterase | - |
| LDO80_RS08550 (TthAA37_16970) | - | 1591314..1592276 (-) | 963 | WP_143586363.1 | dipeptidase | - |
| LDO80_RS08555 (TthAA37_16980) | uvrC | 1592291..1594072 (+) | 1782 | WP_172619200.1 | excinuclease ABC subunit UvrC | - |
| LDO80_RS08560 (TthAA37_16990) | - | 1594123..1595046 (-) | 924 | WP_143586366.1 | ribose-phosphate diphosphokinase | - |
| LDO80_RS08565 (TthAA37_17000) | mtnN | 1595061..1595723 (-) | 663 | WP_143586367.1 | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase | - |
| LDO80_RS08570 (TthAA37_17010) | luxS | 1595720..1596187 (-) | 468 | WP_143586369.1 | S-ribosylhomocysteine lyase | Regulator |
| LDO80_RS08575 (TthAA37_17020) | - | 1596226..1597053 (+) | 828 | WP_143586371.1 | KaiC domain-containing protein | - |
| LDO80_RS08580 (TthAA37_17030) | - | 1597098..1597709 (+) | 612 | WP_014510710.1 | circadian clock protein KaiC | - |
| LDO80_RS08585 (TthAA37_17040) | guaA | 1597722..1599233 (+) | 1512 | WP_143586373.1 | glutamine-hydrolyzing GMP synthase | - |
| LDO80_RS08590 (TthAA37_17050) | - | 1599233..1599796 (+) | 564 | WP_172619201.1 | Uma2 family endonuclease | - |
| LDO80_RS08595 (TthAA37_17060) | - | 1599821..1600108 (+) | 288 | WP_143586377.1 | glutamine synthetase/cystathionine beta-lyase binding protein | - |
| LDO80_RS08600 (TthAA37_17070) | - | 1600108..1600494 (+) | 387 | WP_223965690.1 | VOC family protein | - |
| LDO80_RS08605 (TthAA37_17080) | rnhA | 1600491..1600991 (+) | 501 | WP_223965691.1 | ribonuclease HI | - |
Sequence
Protein
Download Length: 155 a.a. Molecular weight: 16809.31 Da Isoelectric Point: 6.4901
>NTDB_id=75983 LDO80_RS08570 WP_143586369.1 1595720..1596187(-) (luxS) [Thermus thermophilus strain AA3-7]
MAEVESFSLDHTRVKAPYVRLAGRKALAGGVVEKYDLRLAQPNREALPTGALHTLEHLLAGYLRDHLPGVIDLSPMGCRT
GFYLVVEGPVGEEKVLEAFAQALKDVLAHEGEVPGASFKECGNYRDHDLPGAKAWAEKVLQAGLKVQATIPLEAR
MAEVESFSLDHTRVKAPYVRLAGRKALAGGVVEKYDLRLAQPNREALPTGALHTLEHLLAGYLRDHLPGVIDLSPMGCRT
GFYLVVEGPVGEEKVLEAFAQALKDVLAHEGEVPGASFKECGNYRDHDLPGAKAWAEKVLQAGLKVQATIPLEAR
Nucleotide
Download Length: 468 bp
>NTDB_id=75983 LDO80_RS08570 WP_143586369.1 1595720..1596187(-) (luxS) [Thermus thermophilus strain AA3-7]
ATGGCCGAGGTGGAGAGCTTCAGCCTGGACCACACCAGGGTCAAGGCCCCCTACGTGCGCCTGGCGGGGAGGAAGGCCCT
CGCGGGGGGCGTGGTGGAGAAGTACGACCTGAGGCTTGCCCAGCCCAACCGGGAGGCCCTGCCCACGGGGGCCTTGCACA
CCCTGGAGCACCTCCTCGCAGGGTATTTGCGGGACCACCTCCCAGGGGTCATTGACCTCTCCCCCATGGGCTGCCGCACG
GGGTTTTACCTGGTGGTGGAGGGCCCCGTGGGGGAGGAAAAGGTCCTCGAGGCCTTCGCCCAGGCCTTGAAGGACGTCCT
CGCCCACGAGGGGGAGGTCCCCGGGGCGAGCTTCAAGGAGTGCGGCAACTACCGGGACCATGACCTTCCTGGCGCCAAGG
CCTGGGCGGAGAAGGTGCTGCAGGCGGGGCTTAAGGTCCAGGCCACCATTCCCCTGGAGGCGAGGTGA
ATGGCCGAGGTGGAGAGCTTCAGCCTGGACCACACCAGGGTCAAGGCCCCCTACGTGCGCCTGGCGGGGAGGAAGGCCCT
CGCGGGGGGCGTGGTGGAGAAGTACGACCTGAGGCTTGCCCAGCCCAACCGGGAGGCCCTGCCCACGGGGGCCTTGCACA
CCCTGGAGCACCTCCTCGCAGGGTATTTGCGGGACCACCTCCCAGGGGTCATTGACCTCTCCCCCATGGGCTGCCGCACG
GGGTTTTACCTGGTGGTGGAGGGCCCCGTGGGGGAGGAAAAGGTCCTCGAGGCCTTCGCCCAGGCCTTGAAGGACGTCCT
CGCCCACGAGGGGGAGGTCCCCGGGGCGAGCTTCAAGGAGTGCGGCAACTACCGGGACCATGACCTTCCTGGCGCCAAGG
CCTGGGCGGAGAAGGTGCTGCAGGCGGGGCTTAAGGTCCAGGCCACCATTCCCCTGGAGGCGAGGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
42.208 |
99.355 |
0.419 |