Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | BBP27_RS09070 | Genome accession | NZ_CP110721 |
| Coordinates | 1923660..1924706 (-) | Length | 348 a.a. |
| NCBI ID | WP_003747652.1 | Uniprot ID | - |
| Organism | Neisseria sp. RH3002v2g | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1918660..1929706
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBP27_RS09055 | - | 1918771..1919949 (+) | 1179 | WP_036493913.1 | phosphoglycerate kinase | - |
| BBP27_RS09060 | yccS | 1920045..1922180 (-) | 2136 | WP_188211800.1 | YccS family putative transporter | - |
| BBP27_RS09065 | - | 1922344..1923573 (-) | 1230 | WP_003747654.1 | PilT/PilU family type 4a pilus ATPase | - |
| BBP27_RS09070 | pilT | 1923660..1924706 (-) | 1047 | WP_003747652.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| BBP27_RS09075 | - | 1924824..1925522 (+) | 699 | WP_188211799.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| BBP27_RS09080 | proC | 1925599..1926396 (+) | 798 | WP_188211798.1 | pyrroline-5-carboxylate reductase | - |
| BBP27_RS09085 | - | 1926399..1926956 (+) | 558 | WP_188211797.1 | YggT family protein | - |
| BBP27_RS09090 | dksA | 1927189..1927605 (+) | 417 | WP_003747644.1 | RNA polymerase-binding protein DksA | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 38474.11 Da Isoelectric Point: 7.1311
>NTDB_id=756015 BBP27_RS09070 WP_003747652.1 1923660..1924706(-) (pilT) [Neisseria sp. RH3002v2g]
MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDIRRINLPEMSPEEVGTMITSVMNDHQRKLYQQDFEVDFSFELPNVAR
FRVNAFMTERGPAAVFRTIPSTVLTLEELRAPRIFQKIAENPRGLVLVTGPTGSGKSTTLAAMVNYINETQPAHILTIED
PIEFVHQSKKALINQRELHQHTHSFTNALRSALREDPDVILIGEMRDPETISLALTAAETGHLVFGTLHTTGAAKTIDRI
VDVFPAGEKEIVRSMLSESLRAIISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIAQINAALQTGQAHGMQTLDQA
LQTLVRQGTISPEMARSKAQNIENLSVF
MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDIRRINLPEMSPEEVGTMITSVMNDHQRKLYQQDFEVDFSFELPNVAR
FRVNAFMTERGPAAVFRTIPSTVLTLEELRAPRIFQKIAENPRGLVLVTGPTGSGKSTTLAAMVNYINETQPAHILTIED
PIEFVHQSKKALINQRELHQHTHSFTNALRSALREDPDVILIGEMRDPETISLALTAAETGHLVFGTLHTTGAAKTIDRI
VDVFPAGEKEIVRSMLSESLRAIISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIAQINAALQTGQAHGMQTLDQA
LQTLVRQGTISPEMARSKAQNIENLSVF
Nucleotide
Download Length: 1047 bp
>NTDB_id=756015 BBP27_RS09070 WP_003747652.1 1923660..1924706(-) (pilT) [Neisseria sp. RH3002v2g]
ATGCAGATTACCGACTTACTCGCGTTCGGCGTGAAAAACAAAGCCTCCGACCTCCATTTGAGTTCGGGCATTTCCCCTAT
GATACGCGTACACGGCGACATCCGCCGCATCAACCTGCCCGAGATGAGCCCGGAAGAAGTCGGCACCATGATTACCTCGG
TCATGAACGACCACCAGCGCAAGCTCTATCAACAGGATTTTGAAGTCGATTTCTCATTTGAGCTGCCCAATGTTGCCCGT
TTCCGCGTCAACGCCTTTATGACCGAACGCGGCCCGGCCGCCGTATTCCGTACCATTCCGAGCACCGTCCTGACGCTGGA
AGAATTGCGTGCGCCGCGCATTTTCCAAAAAATTGCCGAAAATCCGCGCGGTTTGGTCTTGGTAACCGGCCCGACCGGTT
CGGGTAAATCCACCACGCTGGCAGCGATGGTCAACTACATCAACGAAACCCAACCGGCCCACATTCTGACCATCGAAGAC
CCGATTGAGTTCGTCCATCAAAGCAAAAAAGCGCTCATCAACCAACGCGAGCTGCATCAGCACACCCACAGTTTCACCAA
CGCCCTGCGTTCCGCCCTGCGCGAAGACCCCGACGTGATTTTGATCGGTGAGATGCGCGACCCTGAAACCATCTCCCTCG
CCCTGACCGCCGCCGAAACCGGCCACTTGGTTTTCGGCACGCTGCACACGACCGGCGCCGCCAAAACCATCGACCGTATT
GTCGACGTATTCCCAGCCGGCGAAAAAGAAATCGTGCGTTCCATGTTATCCGAGTCCTTGCGCGCCATCATTTCCCAAAC
CCTGCTGAAAACCCGCGACGGCAACGGCCGCGTCGCCGCGCACGAAATCCTGATTTCCACACCGGCCGTGCGCAACCTCA
TCCGCGAGAACAAAATCGCCCAAATCAACGCCGCCCTCCAAACCGGTCAGGCCCACGGTATGCAAACCCTCGATCAAGCC
CTGCAAACCCTTGTCCGCCAAGGCACCATCAGCCCCGAGATGGCACGCAGCAAAGCGCAAAACATCGAAAACCTCTCTGT
TTTCTAA
ATGCAGATTACCGACTTACTCGCGTTCGGCGTGAAAAACAAAGCCTCCGACCTCCATTTGAGTTCGGGCATTTCCCCTAT
GATACGCGTACACGGCGACATCCGCCGCATCAACCTGCCCGAGATGAGCCCGGAAGAAGTCGGCACCATGATTACCTCGG
TCATGAACGACCACCAGCGCAAGCTCTATCAACAGGATTTTGAAGTCGATTTCTCATTTGAGCTGCCCAATGTTGCCCGT
TTCCGCGTCAACGCCTTTATGACCGAACGCGGCCCGGCCGCCGTATTCCGTACCATTCCGAGCACCGTCCTGACGCTGGA
AGAATTGCGTGCGCCGCGCATTTTCCAAAAAATTGCCGAAAATCCGCGCGGTTTGGTCTTGGTAACCGGCCCGACCGGTT
CGGGTAAATCCACCACGCTGGCAGCGATGGTCAACTACATCAACGAAACCCAACCGGCCCACATTCTGACCATCGAAGAC
CCGATTGAGTTCGTCCATCAAAGCAAAAAAGCGCTCATCAACCAACGCGAGCTGCATCAGCACACCCACAGTTTCACCAA
CGCCCTGCGTTCCGCCCTGCGCGAAGACCCCGACGTGATTTTGATCGGTGAGATGCGCGACCCTGAAACCATCTCCCTCG
CCCTGACCGCCGCCGAAACCGGCCACTTGGTTTTCGGCACGCTGCACACGACCGGCGCCGCCAAAACCATCGACCGTATT
GTCGACGTATTCCCAGCCGGCGAAAAAGAAATCGTGCGTTCCATGTTATCCGAGTCCTTGCGCGCCATCATTTCCCAAAC
CCTGCTGAAAACCCGCGACGGCAACGGCCGCGTCGCCGCGCACGAAATCCTGATTTCCACACCGGCCGTGCGCAACCTCA
TCCGCGAGAACAAAATCGCCCAAATCAACGCCGCCCTCCAAACCGGTCAGGCCCACGGTATGCAAACCCTCGATCAAGCC
CTGCAAACCCTTGTCCGCCAAGGCACCATCAGCCCCGAGATGGCACGCAGCAAAGCGCAAAACATCGAAAACCTCTCTGT
TTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria meningitidis 8013 |
86.705 |
99.425 |
0.862 |
| pilT | Neisseria gonorrhoeae MS11 |
86.705 |
99.425 |
0.862 |
| pilT | Acinetobacter nosocomialis M2 |
68.696 |
99.138 |
0.681 |
| pilT | Acinetobacter baumannii D1279779 |
68.696 |
99.138 |
0.681 |
| pilT | Acinetobacter baumannii strain A118 |
68.696 |
99.138 |
0.681 |
| pilT | Pseudomonas stutzeri DSM 10701 |
68.116 |
99.138 |
0.675 |
| pilT | Pseudomonas aeruginosa PAK |
67.826 |
99.138 |
0.672 |
| pilT | Acinetobacter baylyi ADP1 |
67.536 |
99.138 |
0.67 |
| pilT | Legionella pneumophila strain Lp02 |
65.396 |
97.989 |
0.641 |
| pilT | Legionella pneumophila strain ERS1305867 |
65.396 |
97.989 |
0.641 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
65 |
97.701 |
0.635 |
| pilT | Vibrio cholerae strain A1552 |
65 |
97.701 |
0.635 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.737 |
97.414 |
0.494 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.379 |
100 |
0.414 |
| pilU | Vibrio cholerae strain A1552 |
39.655 |
100 |
0.397 |
| pilU | Acinetobacter baylyi ADP1 |
39.08 |
100 |
0.391 |