Detailed information NTG0075322

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: UKS_RS01000
• Genome accession: NZ_AP021887
• Coordinates: 197191..197514 (+)
• Length: 107 a.a.
• NCBI ID: WP_049496909.1
• Uniprot ID: -
• Organism: Streptococcus sp. 116-D4
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 192191..202514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UKS_RS00975 (UKS_01750)	nagA	192318..193469 (+)	1152	WP_156011418.1	N-acetylglucosamine-6-phosphate deacetylase	-
UKS_RS00980 (UKS_01760)	-	193632..194690 (+)	1059	WP_000649461.1	zinc-dependent alcohol dehydrogenase family protein	-
UKS_RS00985 (UKS_01770)	-	194842..195207 (+)	366	WP_156011419.1	DUF1033 family protein	-
UKS_RS00990 (UKS_01780)	comGA/cglA/cilD	195284..196225 (+)	942	WP_156011420.1	competence type IV pilus ATPase ComGA	Machinery gene
UKS_RS00995 (UKS_01790)	comGB/cglB	196173..197189 (+)	1017	WP_156013011.1	competence type IV pilus assembly protein ComGB	Machinery gene
UKS_RS01000 (UKS_01800)	comGC/cglC	197191..197514 (+)	324	WP_049496909.1	comG operon protein ComGC	Machinery gene
UKS_RS01005 (UKS_01810)	comGD/cglD	197477..197911 (+)	435	WP_049496906.1	competence type IV pilus minor pilin ComGD	Machinery gene
UKS_RS01010 (UKS_01820)	comGE/cglE	197874..198176 (+)	303	WP_153197443.1	competence type IV pilus minor pilin ComGE	Machinery gene
UKS_RS01015 (UKS_01830)	comGF/cglF	198139..198600 (+)	462	WP_049496903.1	competence type IV pilus minor pilin ComGF	Machinery gene
UKS_RS01020 (UKS_01840)	comGG/cglG	198578..198991 (+)	414	WP_156011421.1	competence type IV pilus minor pilin ComGG	Machinery gene
UKS_RS01025 (UKS_01850)	-	199024..199611 (+)	588	WP_156011422.1	class I SAM-dependent methyltransferase	-
UKS_RS01030 (UKS_01860)	comYH	199673..200626 (+)	954	WP_156011423.1	class I SAM-dependent methyltransferase	Machinery gene
UKS_RS01035 (UKS_01870)	-	200676..201866 (+)	1191	WP_156011424.1	acetate kinase	-
UKS_RS01040 (UKS_01880)	rnpA	202015..202386 (+)	372	WP_117306632.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 11944.06 Da
• Isoelectric Point: 9.9097

>NTDB_id=75322 UKS_RS01000 WP_049496909.1 197191..197514(+) (comGC/cglC) [Streptococcus sp. 116-D4]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITEEQAKAYKEYHAKQNTSQSVAD

Nucleotide

• Length: 324 bp

>NTDB_id=75322 UKS_RS01000 WP_049496909.1 197191..197514(+) (comGC/cglC) [Streptococcus sp. 116-D4]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTCACATTGGTGGAGATGTTGGTGGTCTTGCTCAT
CATCAGCGTGCTTCTATTACTCTTTGTACCTAATTTGACCAAACAAAAAGAAGCAGTCAATGATAAAGGAAAGGCTGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAGCTTTATAGCTTGGATAAGAATGAAGATGCTAGCCTAAGTAAGTTACAAGCA
GATGGGCGAATCACAGAAGAACAGGCTAAAGCTTATAAAGAATACCATGCTAAACAAAATACCAGTCAAAGTGTTGCAGA
TTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis NCTC 12261	99.065	100	0.991
comGC/cglC	Streptococcus mitis SK321	93.204	96.262	0.897
comGC/cglC	Streptococcus pneumoniae Rx1	92.157	95.327	0.879
comGC/cglC	Streptococcus pneumoniae D39	92.157	95.327	0.879
comGC/cglC	Streptococcus pneumoniae R6	92.157	95.327	0.879
comGC/cglC	Streptococcus pneumoniae TIGR4	90.291	96.262	0.869
comYC	Streptococcus gordonii str. Challis substr. CH1	69.524	98.131	0.682
comYC	Streptococcus mutans UA140	68.421	88.785	0.607
comYC	Streptococcus mutans UA159	68.421	88.785	0.607
comYC	Streptococcus suis isolate S10	70.37	75.701	0.533
comGC	Lactococcus lactis subsp. cremoris KW2	54.455	94.393	0.514
comGC	Staphylococcus aureus MW2	51.163	80.374	0.411
comGC	Staphylococcus aureus N315	51.163	80.374	0.411