Detailed information NTG0075323

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: UKS_RS01005
• Genome accession: NZ_AP021887
• Coordinates: 197477..197911 (+)
• Length: 144 a.a.
• NCBI ID: WP_049496906.1
• Uniprot ID: -
• Organism: Streptococcus sp. 116-D4
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 192477..202911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UKS_RS00980 (UKS_01760)	-	193632..194690 (+)	1059	WP_000649461.1	zinc-dependent alcohol dehydrogenase family protein	-
UKS_RS00985 (UKS_01770)	-	194842..195207 (+)	366	WP_156011419.1	DUF1033 family protein	-
UKS_RS00990 (UKS_01780)	comGA/cglA/cilD	195284..196225 (+)	942	WP_156011420.1	competence type IV pilus ATPase ComGA	Machinery gene
UKS_RS00995 (UKS_01790)	comGB/cglB	196173..197189 (+)	1017	WP_156013011.1	competence type IV pilus assembly protein ComGB	Machinery gene
UKS_RS01000 (UKS_01800)	comGC/cglC	197191..197514 (+)	324	WP_049496909.1	comG operon protein ComGC	Machinery gene
UKS_RS01005 (UKS_01810)	comGD/cglD	197477..197911 (+)	435	WP_049496906.1	competence type IV pilus minor pilin ComGD	Machinery gene
UKS_RS01010 (UKS_01820)	comGE/cglE	197874..198176 (+)	303	WP_153197443.1	competence type IV pilus minor pilin ComGE	Machinery gene
UKS_RS01015 (UKS_01830)	comGF/cglF	198139..198600 (+)	462	WP_049496903.1	competence type IV pilus minor pilin ComGF	Machinery gene
UKS_RS01020 (UKS_01840)	comGG/cglG	198578..198991 (+)	414	WP_156011421.1	competence type IV pilus minor pilin ComGG	Machinery gene
UKS_RS01025 (UKS_01850)	-	199024..199611 (+)	588	WP_156011422.1	class I SAM-dependent methyltransferase	-
UKS_RS01030 (UKS_01860)	comYH	199673..200626 (+)	954	WP_156011423.1	class I SAM-dependent methyltransferase	Machinery gene
UKS_RS01035 (UKS_01870)	-	200676..201866 (+)	1191	WP_156011424.1	acetate kinase	-
UKS_RS01040 (UKS_01880)	rnpA	202015..202386 (+)	372	WP_117306632.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15788.26 Da
• Isoelectric Point: 10.4335

>NTDB_id=75323 UKS_RS01005 WP_049496906.1 197477..197911(+) (comGD/cglD) [Streptococcus sp. 116-D4]
MLNKIPVKVLQIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=75323 UKS_RS01005 WP_049496906.1 197477..197911(+) (comGD/cglD) [Streptococcus sp. 116-D4]
ATGCTAAACAAAATACCAGTCAAAGTGTTGCAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTATCCGGTTCTGTCCAGTCCACTTTTTCAGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACTCAAAAACGCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAACTTAGATGGGCAGACG
ATTAGCAACGGCAGTCAAAAGTTGACAGTTCCTAAAGGAATTCAGGCACCATCGGGACAAAGTATCACATTTGACCGAGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	97.222	100	0.972
comGD/cglD	Streptococcus pneumoniae Rx1	99.248	92.361	0.917
comGD/cglD	Streptococcus pneumoniae D39	99.248	92.361	0.917
comGD/cglD	Streptococcus pneumoniae R6	99.248	92.361	0.917
comGD/cglD	Streptococcus pneumoniae TIGR4	98.496	92.361	0.91
comGD/cglD	Streptococcus mitis SK321	96.992	92.361	0.896
comYD	Streptococcus gordonii str. Challis substr. CH1	56.716	93.056	0.528
comYD	Streptococcus mutans UA140	48.837	89.583	0.437
comYD	Streptococcus mutans UA159	48.837	89.583	0.437