Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | OHJ31_RS07095 | Genome accession | NZ_CP109769 |
| Coordinates | 1585684..1586700 (+) | Length | 338 a.a. |
| NCBI ID | WP_350327449.1 | Uniprot ID | - |
| Organism | Pectobacterium aroidearum strain B2-6 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1580684..1591700
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHJ31_RS07060 (OHJ31_07035) | - | 1580913..1581173 (-) | 261 | WP_072037261.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| OHJ31_RS07065 (OHJ31_07040) | hemW | 1581402..1582544 (-) | 1143 | WP_350327446.1 | radical SAM family heme chaperone HemW | - |
| OHJ31_RS07070 (OHJ31_07045) | - | 1582537..1583130 (-) | 594 | WP_350327447.1 | XTP/dITP diphosphatase | - |
| OHJ31_RS07075 (OHJ31_07050) | yggU | 1583148..1583438 (-) | 291 | WP_010279110.1 | DUF167 family protein YggU | - |
| OHJ31_RS07080 (OHJ31_07055) | - | 1583435..1583989 (-) | 555 | WP_010295003.1 | YggT family protein | - |
| OHJ31_RS07085 (OHJ31_07060) | proC | 1584038..1584859 (-) | 822 | WP_015841592.1 | pyrroline-5-carboxylate reductase | - |
| OHJ31_RS07090 (OHJ31_07065) | - | 1584950..1585663 (-) | 714 | WP_350327448.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| OHJ31_RS07095 (OHJ31_07070) | pilT | 1585684..1586700 (+) | 1017 | WP_350327449.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| OHJ31_RS07100 (OHJ31_07075) | - | 1586669..1588495 (-) | 1827 | WP_350327450.1 | diguanylate cyclase | - |
| OHJ31_RS07105 (OHJ31_07080) | - | 1589024..1590595 (-) | 1572 | WP_180778637.1 | methyl-accepting chemotaxis protein | - |
| OHJ31_RS07110 (OHJ31_07085) | nsrR | 1590912..1591337 (+) | 426 | WP_015841587.1 | nitric oxide-sensing transcriptional repressor NsrR | - |
Sequence
Protein
Download Length: 338 a.a. Molecular weight: 36991.25 Da Isoelectric Point: 6.7684
>NTDB_id=749113 OHJ31_RS07095 WP_350327449.1 1585684..1586700(+) (pilT) [Pectobacterium aroidearum strain B2-6]
MELDEWMVRSVKHNASDLHLCSGHPPVLRVDGRLQPENTLPRLTPEQVAQWCDTWLEPAQREQLRQFGQIDGALMLPDGQ
RLRVNVFRQREGLSAALRIIPSVQPSLDGLHAPPVLSTLLEKPNGLILITGATGSGKSTTLAAMLGALNDSSDRHVITLE
DPIEFIHASRRCLIQQREIGAHSASFAQALRATLREDPDVILLGELRDTETIRLALTAAETGHLVLSTLHTRSASQAVDR
LIDVFPGEEKAYVRSQLATCLQAVVTQRLLPSAHGGRIALYEVLTATAAVSNLIREGKTHQLPGLIQTGTAAGMQTFEQS
YQQRCRDGFISHNCALAV
MELDEWMVRSVKHNASDLHLCSGHPPVLRVDGRLQPENTLPRLTPEQVAQWCDTWLEPAQREQLRQFGQIDGALMLPDGQ
RLRVNVFRQREGLSAALRIIPSVQPSLDGLHAPPVLSTLLEKPNGLILITGATGSGKSTTLAAMLGALNDSSDRHVITLE
DPIEFIHASRRCLIQQREIGAHSASFAQALRATLREDPDVILLGELRDTETIRLALTAAETGHLVLSTLHTRSASQAVDR
LIDVFPGEEKAYVRSQLATCLQAVVTQRLLPSAHGGRIALYEVLTATAAVSNLIREGKTHQLPGLIQTGTAAGMQTFEQS
YQQRCRDGFISHNCALAV
Nucleotide
Download Length: 1017 bp
>NTDB_id=749113 OHJ31_RS07095 WP_350327449.1 1585684..1586700(+) (pilT) [Pectobacterium aroidearum strain B2-6]
ATGGAGTTGGATGAGTGGATGGTGCGTAGTGTAAAACATAATGCCTCGGATCTGCACCTTTGTAGCGGCCACCCTCCGGT
GCTACGCGTGGATGGGCGGCTACAGCCTGAAAATACCTTACCACGTTTAACGCCGGAGCAGGTGGCACAATGGTGCGATA
CCTGGCTCGAACCGGCGCAGAGAGAACAACTGCGGCAGTTTGGTCAGATAGACGGCGCGTTAATGCTGCCTGATGGGCAG
CGTCTGCGAGTCAATGTGTTTCGCCAGCGAGAAGGGCTGTCTGCGGCGCTGCGTATTATCCCGTCCGTTCAGCCGTCATT
GGACGGGCTACACGCGCCACCCGTTCTGTCGACGCTGTTGGAGAAACCGAACGGGCTGATCCTGATTACCGGTGCGACGG
GGAGCGGTAAATCCACGACGCTGGCGGCAATGCTCGGGGCGTTAAATGACAGCAGCGATCGCCATGTGATTACGCTGGAG
GATCCGATCGAGTTTATCCATGCCAGCCGACGCTGCCTGATTCAACAGCGAGAGATCGGTGCGCACAGCGCGTCTTTTGC
ACAGGCGCTACGGGCCACCTTGCGGGAAGATCCCGATGTGATTCTGCTGGGAGAATTGCGCGATACGGAGACGATTCGGC
TGGCGCTGACAGCGGCGGAAACCGGCCATCTGGTGCTATCCACGCTGCATACGCGCAGTGCATCGCAGGCGGTCGATCGT
CTGATTGACGTCTTTCCCGGTGAAGAGAAAGCCTATGTTCGCAGTCAGCTAGCCACCTGTTTGCAGGCCGTGGTGACGCA
AAGGTTGTTGCCTTCTGCACACGGCGGTCGCATTGCGCTTTATGAAGTGCTGACGGCGACAGCGGCAGTCAGCAACCTGA
TTCGGGAAGGGAAAACGCATCAGCTTCCCGGCCTGATTCAAACGGGAACGGCTGCGGGCATGCAAACGTTCGAGCAAAGC
TACCAGCAGCGCTGTCGGGATGGGTTTATTTCACACAATTGCGCCCTTGCCGTTTAG
ATGGAGTTGGATGAGTGGATGGTGCGTAGTGTAAAACATAATGCCTCGGATCTGCACCTTTGTAGCGGCCACCCTCCGGT
GCTACGCGTGGATGGGCGGCTACAGCCTGAAAATACCTTACCACGTTTAACGCCGGAGCAGGTGGCACAATGGTGCGATA
CCTGGCTCGAACCGGCGCAGAGAGAACAACTGCGGCAGTTTGGTCAGATAGACGGCGCGTTAATGCTGCCTGATGGGCAG
CGTCTGCGAGTCAATGTGTTTCGCCAGCGAGAAGGGCTGTCTGCGGCGCTGCGTATTATCCCGTCCGTTCAGCCGTCATT
GGACGGGCTACACGCGCCACCCGTTCTGTCGACGCTGTTGGAGAAACCGAACGGGCTGATCCTGATTACCGGTGCGACGG
GGAGCGGTAAATCCACGACGCTGGCGGCAATGCTCGGGGCGTTAAATGACAGCAGCGATCGCCATGTGATTACGCTGGAG
GATCCGATCGAGTTTATCCATGCCAGCCGACGCTGCCTGATTCAACAGCGAGAGATCGGTGCGCACAGCGCGTCTTTTGC
ACAGGCGCTACGGGCCACCTTGCGGGAAGATCCCGATGTGATTCTGCTGGGAGAATTGCGCGATACGGAGACGATTCGGC
TGGCGCTGACAGCGGCGGAAACCGGCCATCTGGTGCTATCCACGCTGCATACGCGCAGTGCATCGCAGGCGGTCGATCGT
CTGATTGACGTCTTTCCCGGTGAAGAGAAAGCCTATGTTCGCAGTCAGCTAGCCACCTGTTTGCAGGCCGTGGTGACGCA
AAGGTTGTTGCCTTCTGCACACGGCGGTCGCATTGCGCTTTATGAAGTGCTGACGGCGACAGCGGCAGTCAGCAACCTGA
TTCGGGAAGGGAAAACGCATCAGCTTCCCGGCCTGATTCAAACGGGAACGGCTGCGGGCATGCAAACGTTCGAGCAAAGC
TACCAGCAGCGCTGTCGGGATGGGTTTATTTCACACAATTGCGCCCTTGCCGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.