Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | NXZ70_RS03795 | Genome accession | NZ_CP104049 |
| Coordinates | 779352..780332 (+) | Length | 326 a.a. |
| NCBI ID | WP_023223875.1 | Uniprot ID | A0A3T9Y8K5 |
| Organism | Salmonella enterica subsp. enterica serovar Kentucky strain Sal-FJ2064 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 715656..781224 | 779352..780332 | within | 0 |
Gene organization within MGE regions
Location: 715656..781224
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NXZ70_RS03480 (NXZ70_17525) | dkgA | 716231..717058 (-) | 828 | WP_000013100.1 | 2,5-didehydrogluconate reductase DkgA | - |
| NXZ70_RS03485 (NXZ70_17520) | yqhD | 717164..718327 (-) | 1164 | WP_001058720.1 | alcohol dehydrogenase | - |
| NXZ70_RS03490 (NXZ70_17515) | - | 718520..719419 (+) | 900 | WP_001078198.1 | AraC family transcriptional regulator | - |
| NXZ70_RS03495 (NXZ70_17510) | yghB | 719483..720142 (-) | 660 | WP_000268441.1 | DedA family general envelope maintenance protein YghB | - |
| NXZ70_RS03500 (NXZ70_17505) | metC | 720282..721469 (-) | 1188 | WP_023259267.1 | cystathionine beta-lyase | - |
| NXZ70_RS03505 (NXZ70_17500) | exbB | 721721..722455 (+) | 735 | WP_023223863.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| NXZ70_RS03510 (NXZ70_17495) | exbD | 722462..722887 (+) | 426 | WP_001251476.1 | TonB system transport protein ExbD | - |
| NXZ70_RS03515 (NXZ70_17490) | - | 723000..723884 (-) | 885 | WP_000019032.1 | SDR family oxidoreductase | - |
| NXZ70_RS03520 (NXZ70_17485) | - | 724008..724412 (-) | 405 | WP_000665656.1 | hypothetical protein | - |
| NXZ70_RS03525 (NXZ70_17480) | - | 724399..724809 (-) | 411 | WP_001524105.1 | hypothetical protein | - |
| NXZ70_RS03530 (NXZ70_17475) | - | 724913..725416 (+) | 504 | WP_001534190.1 | ESA_00282 family adhesion-associated protein | - |
| NXZ70_RS03535 (NXZ70_17470) | - | 725695..726189 (+) | 495 | WP_000439335.1 | TIGR00645 family protein | - |
| NXZ70_RS03540 (NXZ70_17465) | - | 726496..728139 (+) | 1644 | WP_021000782.1 | methyl-accepting chemotaxis protein | - |
| NXZ70_RS03545 (NXZ70_17460) | - | 728224..728511 (+) | 288 | WP_001059119.1 | DUF2623 family protein | - |
| NXZ70_RS03550 (NXZ70_17455) | hybO | 728701..729819 (+) | 1119 | WP_000145429.1 | hydrogenase 2 small subunit | - |
| NXZ70_RS03555 (NXZ70_17450) | hybA | 729822..730808 (+) | 987 | WP_001081721.1 | hydrogenase 2 operon protein HybA | - |
| NXZ70_RS03560 (NXZ70_17445) | hybB | 730798..731976 (+) | 1179 | WP_000017678.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| NXZ70_RS03565 (NXZ70_17440) | hybC | 731973..733676 (+) | 1704 | WP_000083044.1 | hydrogenase 2 large subunit | - |
| NXZ70_RS03570 (NXZ70_17435) | - | 733676..734170 (+) | 495 | WP_001221960.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| NXZ70_RS03575 (NXZ70_17430) | hybE | 734163..734651 (+) | 489 | WP_000004951.1 | hydrogenase-2 assembly chaperone | - |
| NXZ70_RS03580 (NXZ70_17425) | hypA | 734644..734985 (+) | 342 | WP_000544945.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| NXZ70_RS03585 (NXZ70_17420) | hybG | 735013..735261 (+) | 249 | WP_000334887.1 | hydrogenase maturation factor HybG | - |
| NXZ70_RS03590 (NXZ70_17415) | - | 735337..736389 (+) | 1053 | WP_001032017.1 | ABC transporter substrate-binding protein | - |
| NXZ70_RS03595 (NXZ70_17410) | - | 736389..737099 (+) | 711 | WP_023223864.1 | molybdate ABC transporter substrate-binding protein | - |
| NXZ70_RS03600 (NXZ70_17405) | yghU | 737167..738033 (-) | 867 | WP_000774852.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| NXZ70_RS03605 (NXZ70_17400) | gss | 738260..740116 (+) | 1857 | WP_023223865.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| NXZ70_RS03610 (NXZ70_17395) | - | 740786..741844 (+) | 1059 | WP_000475247.1 | methyl-accepting chemotaxis protein | - |
| NXZ70_RS03615 (NXZ70_17390) | uxaC | 742144..743556 (-) | 1413 | WP_000190182.1 | glucuronate isomerase | - |
| NXZ70_RS03620 (NXZ70_17385) | - | 743568..745040 (-) | 1473 | WP_000437132.1 | fructuronate reductase | - |
| NXZ70_RS03625 (NXZ70_17380) | uxuA | 745151..746335 (-) | 1185 | WP_000815487.1 | mannonate dehydratase | - |
| NXZ70_RS03630 (NXZ70_17375) | - | 746739..748043 (+) | 1305 | WP_000784371.1 | MFS transporter | - |
| NXZ70_RS03635 (NXZ70_17370) | - | 748439..749317 (+) | 879 | WP_000089254.1 | carbon-nitrogen hydrolase family protein | - |
| NXZ70_RS03640 (NXZ70_17365) | - | 749356..750279 (+) | 924 | WP_000540892.1 | polysaccharide deacetylase | - |
| NXZ70_RS03645 (NXZ70_17360) | - | 751004..751489 (+) | 486 | WP_000338757.1 | Hcp family type VI secretion system effector | - |
| NXZ70_RS03650 (NXZ70_17355) | iraD | 751489..751869 (+) | 381 | WP_023205443.1 | anti-adapter protein IraD | - |
| NXZ70_RS03655 (NXZ70_17350) | - | 752005..753489 (-) | 1485 | WP_023223867.1 | NAD-dependent phenylacetaldehyde dehydrogenase | - |
| NXZ70_RS03660 (NXZ70_17345) | - | 753651..754952 (+) | 1302 | WP_048590248.1 | FAD-binding oxidoreductase | - |
| NXZ70_RS03665 (NXZ70_17340) | - | 754967..755341 (+) | 375 | WP_000542984.1 | cupin domain-containing protein | - |
| NXZ70_RS03670 (NXZ70_17335) | - | 755550..757049 (+) | 1500 | WP_000475956.1 | APC family permease | - |
| NXZ70_RS03675 (NXZ70_17330) | - | 757027..757584 (+) | 558 | WP_001729076.1 | DUF3156 family protein | - |
| NXZ70_RS03680 (NXZ70_17325) | - | 757689..758372 (-) | 684 | WP_017441068.1 | LuxR family transcriptional regulator | - |
| NXZ70_RS03685 (NXZ70_17320) | - | 760082..761245 (-) | 1164 | WP_232660206.1 | ferric reductase-like transmembrane domain-containing protein | - |
| NXZ70_RS03690 (NXZ70_17315) | - | 761477..761740 (-) | 264 | WP_017441072.1 | YdgH/BhsA/McbA-like domain containing protein | - |
| NXZ70_RS03695 (NXZ70_17310) | - | 761766..762389 (-) | 624 | WP_000697438.1 | FMN-dependent NADH-azoreductase | - |
| NXZ70_RS03700 (NXZ70_17305) | - | 762490..763395 (+) | 906 | WP_000568121.1 | LysR family transcriptional regulator | - |
| NXZ70_RS03705 (NXZ70_17300) | - | 763669..763897 (-) | 229 | Protein_725 | Arm DNA-binding domain-containing protein | - |
| NXZ70_RS03715 (NXZ70_17290) | - | 764237..764944 (-) | 708 | WP_000234466.1 | DUF554 domain-containing protein | - |
| NXZ70_RS03720 (NXZ70_17285) | - | 765369..767504 (+) | 2136 | WP_052939278.1 | ornithine decarboxylase | - |
| NXZ70_RS03725 (NXZ70_17280) | - | 767566..768822 (-) | 1257 | WP_001049804.1 | nucleoside permease | - |
| NXZ70_RS03730 (NXZ70_17275) | mltC | 769039..770124 (-) | 1086 | WP_001650652.1 | membrane-bound lytic murein transglycosylase MltC | - |
| NXZ70_RS03735 (NXZ70_17270) | - | 770237..770512 (-) | 276 | WP_000091706.1 | oxidative damage protection protein | - |
| NXZ70_RS03740 (NXZ70_17265) | mutY | 770540..771592 (-) | 1053 | WP_023223872.1 | A/G-specific adenine glycosylase | - |
| NXZ70_RS03745 (NXZ70_17260) | trmB | 771747..772466 (+) | 720 | WP_017441077.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| NXZ70_RS03750 (NXZ70_17255) | - | 772466..772792 (+) | 327 | WP_001107559.1 | YggL family protein | - |
| NXZ70_RS03755 (NXZ70_17250) | - | 772842..773561 (+) | 720 | WP_000984827.1 | DUF2884 domain-containing protein | - |
| NXZ70_RS03760 (NXZ70_17245) | ansB | 773750..774796 (+) | 1047 | WP_000394189.1 | L-asparaginase 2 | - |
| NXZ70_RS03765 (NXZ70_17240) | - | 774929..775936 (+) | 1008 | WP_023223873.1 | DUF1202 domain-containing protein | - |
| NXZ70_RS03770 (NXZ70_17235) | hemW | 776028..777164 (-) | 1137 | WP_023223874.1 | radical SAM family heme chaperone HemW | - |
| NXZ70_RS03775 (NXZ70_17230) | - | 777157..777750 (-) | 594 | WP_001174769.1 | XTP/dITP diphosphatase | - |
| NXZ70_RS03780 (NXZ70_17225) | yggU | 777758..778048 (-) | 291 | WP_001277203.1 | DUF167 family protein YggU | - |
| NXZ70_RS03785 (NXZ70_17220) | - | 778045..778611 (-) | 567 | WP_001094848.1 | YggT family protein | - |
| NXZ70_RS03790 (NXZ70_17215) | - | 778630..779334 (-) | 705 | WP_000997812.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| NXZ70_RS03795 (NXZ70_17210) | pilT | 779352..780332 (+) | 981 | WP_023223875.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| NXZ70_RS03800 (NXZ70_17205) | - | 780464..781150 (+) | 687 | WP_023223876.1 | IclR family transcriptional regulator | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 36153.44 Da Isoelectric Point: 7.8166
>NTDB_id=727383 NXZ70_RS03795 WP_023223875.1 779352..780332(+) (pilT) [Salmonella enterica subsp. enterica serovar Kentucky strain Sal-FJ2064]
MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMEIAPFTAPDVDRLLLDWLNDAQQYQWRTHGQLDFAVSLSGTRRLRA
SAFTHQQGTSLALRLLPERCPDLAEIQMPPIVPALLASENGLILVTGATGCGKSTTLAAMVGHLNQHADKHILTLEDPIE
YRYTSKRCLIQQREIGQHCATFAAGLRAALRQDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKEPVRSQLAGSLRAVLSQKLEVDRQDGRVALFELLINTPATGNLIREGKLHQLAHVIQTGQQQGMMTFAQSAQWR
QAQGRL
MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMEIAPFTAPDVDRLLLDWLNDAQQYQWRTHGQLDFAVSLSGTRRLRA
SAFTHQQGTSLALRLLPERCPDLAEIQMPPIVPALLASENGLILVTGATGCGKSTTLAAMVGHLNQHADKHILTLEDPIE
YRYTSKRCLIQQREIGQHCATFAAGLRAALRQDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKEPVRSQLAGSLRAVLSQKLEVDRQDGRVALFELLINTPATGNLIREGKLHQLAHVIQTGQQQGMMTFAQSAQWR
QAQGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=727383 NXZ70_RS03795 WP_023223875.1 779352..780332(+) (pilT) [Salmonella enterica subsp. enterica serovar Kentucky strain Sal-FJ2064]
ATGAATATGGAAGAAATTGTGACGCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGTAACGCCTGGCCTGCGCG
ATGGCGCAAACAAGGACGCATGGAGATCGCGCCTTTTACCGCGCCAGATGTCGACAGGCTTCTGCTTGATTGGCTTAATG
ATGCGCAACAATATCAGTGGCGAACGCACGGCCAGCTTGATTTCGCCGTCTCGCTGTCTGGCACGCGGCGCCTACGCGCC
AGTGCGTTCACACATCAACAGGGAACGTCGCTGGCGCTACGGCTATTGCCCGAGCGTTGTCCTGATCTGGCGGAAATCCA
GATGCCGCCGATAGTACCCGCACTGCTTGCCAGCGAGAACGGACTGATTCTGGTCACTGGCGCTACTGGCTGCGGGAAGT
CCACCACGCTGGCGGCGATGGTGGGACATCTTAATCAACATGCCGATAAACACATCCTGACGCTGGAAGATCCTATTGAG
TACCGTTACACCAGCAAGCGTTGCCTGATACAGCAGCGGGAAATCGGCCAGCATTGCGCCACTTTTGCCGCCGGGCTGCG
CGCAGCGTTACGTCAAGATCCCGATGTCATTTTACTGGGAGAGCTGCGTGACAGCGAGACCATTCGCCTGGCGCTGACGG
CGGCGGAAACGGGGCATCTGGTACTGGCAACCCTGCATACTCGCGGTGCGGCGCAGGCGGTGGAAAGATTAGTGGATAGT
TTTCCGGCGCAGGAAAAAGAACCGGTACGCAGTCAACTGGCGGGTAGTCTGCGCGCCGTACTATCACAAAAACTGGAGGT
CGACAGACAGGATGGGCGCGTGGCGTTGTTTGAATTACTGATTAATACGCCAGCCACAGGGAATTTGATCCGTGAAGGCA
AACTCCATCAGTTGGCCCACGTGATACAAACCGGGCAGCAGCAGGGGATGATGACATTCGCCCAGAGCGCGCAATGGCGT
CAGGCGCAGGGACGACTGTAG
ATGAATATGGAAGAAATTGTGACGCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGTAACGCCTGGCCTGCGCG
ATGGCGCAAACAAGGACGCATGGAGATCGCGCCTTTTACCGCGCCAGATGTCGACAGGCTTCTGCTTGATTGGCTTAATG
ATGCGCAACAATATCAGTGGCGAACGCACGGCCAGCTTGATTTCGCCGTCTCGCTGTCTGGCACGCGGCGCCTACGCGCC
AGTGCGTTCACACATCAACAGGGAACGTCGCTGGCGCTACGGCTATTGCCCGAGCGTTGTCCTGATCTGGCGGAAATCCA
GATGCCGCCGATAGTACCCGCACTGCTTGCCAGCGAGAACGGACTGATTCTGGTCACTGGCGCTACTGGCTGCGGGAAGT
CCACCACGCTGGCGGCGATGGTGGGACATCTTAATCAACATGCCGATAAACACATCCTGACGCTGGAAGATCCTATTGAG
TACCGTTACACCAGCAAGCGTTGCCTGATACAGCAGCGGGAAATCGGCCAGCATTGCGCCACTTTTGCCGCCGGGCTGCG
CGCAGCGTTACGTCAAGATCCCGATGTCATTTTACTGGGAGAGCTGCGTGACAGCGAGACCATTCGCCTGGCGCTGACGG
CGGCGGAAACGGGGCATCTGGTACTGGCAACCCTGCATACTCGCGGTGCGGCGCAGGCGGTGGAAAGATTAGTGGATAGT
TTTCCGGCGCAGGAAAAAGAACCGGTACGCAGTCAACTGGCGGGTAGTCTGCGCGCCGTACTATCACAAAAACTGGAGGT
CGACAGACAGGATGGGCGCGTGGCGTTGTTTGAATTACTGATTAATACGCCAGCCACAGGGAATTTGATCCGTGAAGGCA
AACTCCATCAGTTGGCCCACGTGATACAAACCGGGCAGCAGCAGGGGATGATGACATTCGCCCAGAGCGCGCAATGGCGT
CAGGCGCAGGGACGACTGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
48.318 |
100 |
0.485 |
| pilT | Vibrio cholerae strain A1552 |
48.318 |
100 |
0.485 |
| pilT | Neisseria meningitidis 8013 |
46.951 |
100 |
0.472 |
| pilT | Neisseria gonorrhoeae MS11 |
46.646 |
100 |
0.469 |
| pilT | Pseudomonas aeruginosa PAK |
44.954 |
100 |
0.451 |
| pilT | Acinetobacter baylyi ADP1 |
44.648 |
100 |
0.448 |
| pilT | Acinetobacter baumannii D1279779 |
44.648 |
100 |
0.448 |
| pilT | Acinetobacter baumannii strain A118 |
44.648 |
100 |
0.448 |
| pilT | Pseudomonas stutzeri DSM 10701 |
44.648 |
100 |
0.448 |
| pilT | Acinetobacter nosocomialis M2 |
44.343 |
100 |
0.445 |
| pilT | Legionella pneumophila strain ERS1305867 |
44.34 |
97.546 |
0.433 |
| pilT | Legionella pneumophila strain Lp02 |
44.34 |
97.546 |
0.433 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
42.453 |
97.546 |
0.414 |
| pilU | Vibrio cholerae strain A1552 |
38.871 |
97.853 |
0.38 |
| pilU | Pseudomonas stutzeri DSM 10701 |
36.637 |
100 |
0.374 |
| pilU | Acinetobacter baylyi ADP1 |
36.42 |
99.387 |
0.362 |