Detailed information NTG0714953

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: NQZ91_RS07965
• Genome accession: NZ_CP102145
• Coordinates: 1588847..1589146 (+)
• Length: 99 a.a.
• NCBI ID: WP_170243122.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DNS20
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1583847..1594146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ91_RS07940 (NQZ91_07940)	ltrA	1584188..1585465 (+)	1278	Protein_1551	group II intron reverse transcriptase/maturase	-
NQZ91_RS07945 (NQZ91_07945)	comX/sigX	1585899..1586369 (+)	471	WP_105110737.1	transcriptional regulator	Regulator
NQZ91_RS07950 (NQZ91_07950)	-	1586500..1586853 (+)	354	WP_105110736.1	DUF1033 family protein	-
NQZ91_RS07955 (NQZ91_07955)	comYA	1586947..1587897 (+)	951	WP_105110735.1	competence type IV pilus ATPase ComGA	Machinery gene
NQZ91_RS07960 (NQZ91_07960)	comYB	1587809..1588846 (+)	1038	WP_172068135.1	competence type IV pilus assembly protein ComGB	Machinery gene
NQZ91_RS07965 (NQZ91_07965)	comYC	1588847..1589146 (+)	300	WP_170243122.1	competence type IV pilus major pilin ComGC	Machinery gene
NQZ91_RS07970 (NQZ91_07970)	comGD/cglD	1589109..1589534 (+)	426	WP_257104952.1	competence type IV pilus minor pilin ComGD	Machinery gene
NQZ91_RS07975 (NQZ91_07975)	comYE	1589506..1589799 (+)	294	WP_105122988.1	competence type IV pilus minor pilin ComGE	Machinery gene
NQZ91_RS07980 (NQZ91_07980)	comYF	1589762..1590220 (+)	459	WP_398599394.1	competence type IV pilus minor pilin ComGF	Machinery gene
NQZ91_RS07985 (NQZ91_07985)	comGG	1590198..1590800 (+)	603	WP_257117307.1	competence type IV pilus minor pilin ComGG	-
NQZ91_RS07990 (NQZ91_07990)	comYH	1590851..1591804 (+)	954	WP_105122991.1	class I SAM-dependent methyltransferase	Machinery gene
NQZ91_RS07995 (NQZ91_07995)	-	1591854..1593041 (+)	1188	WP_257117308.1	acetate kinase	-
NQZ91_RS08000 (NQZ91_08000)	-	1593356..1593907 (+)	552	WP_125065555.1	folate family ECF transporter S component	-

Sequence

Protein

• Length: 99 a.a.
• Molecular weight: 11177.21 Da
• Isoelectric Point: 9.8891

>NTDB_id=714953 NQZ91_RS07965 WP_170243122.1 1588847..1589146(+) (comYC) [Streptococcus suis strain DNS20]
MKKLLKMKKKGFTLVEMLVVLGIISVLLLLFVPNLSKQKEAVRKKGDQAVVKVVESQMELYELEHDKKATVADLQSAGYI
DKKQAEEYEKAKASNPDNQ

Nucleotide

• Length: 300 bp

>NTDB_id=714953 NQZ91_RS07965 WP_170243122.1 1588847..1589146(+) (comYC) [Streptococcus suis strain DNS20]
ATGAAGAAATTACTAAAAATGAAGAAAAAAGGTTTCACTCTGGTGGAAATGTTAGTCGTCCTTGGAATTATTAGTGTGCT
TTTACTCTTGTTTGTGCCTAATTTGAGCAAGCAGAAAGAGGCGGTACGGAAAAAAGGAGATCAGGCAGTTGTCAAAGTAG
TAGAGAGTCAGATGGAGCTCTATGAATTGGAACATGACAAGAAAGCAACAGTAGCCGATTTGCAATCTGCTGGCTACATT
GACAAAAAACAGGCAGAAGAATATGAGAAAGCTAAAGCCTCTAATCCAGATAACCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (7-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus suis isolate S10	79.348	92.929	0.737
comGC/cglC	Streptococcus mitis SK321	60.606	100	0.606
comGC/cglC	Streptococcus mitis NCTC 12261	58.252	100	0.606
comGC/cglC	Streptococcus pneumoniae TIGR4	59.596	100	0.596
comYC	Streptococcus gordonii str. Challis substr. CH1	65.169	89.899	0.586
comGC/cglC	Streptococcus pneumoniae Rx1	63.043	92.929	0.586
comGC/cglC	Streptococcus pneumoniae D39	63.043	92.929	0.586
comGC/cglC	Streptococcus pneumoniae R6	63.043	92.929	0.586
comGC	Lactococcus lactis subsp. cremoris KW2	54.545	100	0.545
comYC	Streptococcus mutans UA140	55.208	96.97	0.535
comYC	Streptococcus mutans UA159	55.208	96.97	0.535
comGC	Staphylococcus aureus MW2	45.882	85.859	0.394
comGC	Staphylococcus aureus N315	45.882	85.859	0.394
comGC	Bacillus subtilis subsp. subtilis str. 168	49.351	77.778	0.384
comGC	Latilactobacillus sakei subsp. sakei 23K	45	80.808	0.364