Detailed information NTG0714954

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: NQZ91_RS07970
• Genome accession: NZ_CP102145
• Coordinates: 1589109..1589534 (+)
• Length: 141 a.a.
• NCBI ID: WP_257104952.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DNS20
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1584109..1594534

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ91_RS07940 (NQZ91_07940)	ltrA	1584188..1585465 (+)	1278	Protein_1551	group II intron reverse transcriptase/maturase	-
NQZ91_RS07945 (NQZ91_07945)	comX/sigX	1585899..1586369 (+)	471	WP_105110737.1	transcriptional regulator	Regulator
NQZ91_RS07950 (NQZ91_07950)	-	1586500..1586853 (+)	354	WP_105110736.1	DUF1033 family protein	-
NQZ91_RS07955 (NQZ91_07955)	comYA	1586947..1587897 (+)	951	WP_105110735.1	competence type IV pilus ATPase ComGA	Machinery gene
NQZ91_RS07960 (NQZ91_07960)	comYB	1587809..1588846 (+)	1038	WP_172068135.1	competence type IV pilus assembly protein ComGB	Machinery gene
NQZ91_RS07965 (NQZ91_07965)	comYC	1588847..1589146 (+)	300	WP_170243122.1	competence type IV pilus major pilin ComGC	Machinery gene
NQZ91_RS07970 (NQZ91_07970)	comGD/cglD	1589109..1589534 (+)	426	WP_257104952.1	competence type IV pilus minor pilin ComGD	Machinery gene
NQZ91_RS07975 (NQZ91_07975)	comYE	1589506..1589799 (+)	294	WP_105122988.1	competence type IV pilus minor pilin ComGE	Machinery gene
NQZ91_RS07980 (NQZ91_07980)	comYF	1589762..1590220 (+)	459	WP_398599394.1	competence type IV pilus minor pilin ComGF	Machinery gene
NQZ91_RS07985 (NQZ91_07985)	comGG	1590198..1590800 (+)	603	WP_257117307.1	competence type IV pilus minor pilin ComGG	-
NQZ91_RS07990 (NQZ91_07990)	comYH	1590851..1591804 (+)	954	WP_105122991.1	class I SAM-dependent methyltransferase	Machinery gene
NQZ91_RS07995 (NQZ91_07995)	-	1591854..1593041 (+)	1188	WP_257117308.1	acetate kinase	-
NQZ91_RS08000 (NQZ91_08000)	-	1593356..1593907 (+)	552	WP_125065555.1	folate family ECF transporter S component	-

Sequence

Protein

• Length: 141 a.a.
• Molecular weight: 15788.19 Da
• Isoelectric Point: 9.9441

>NTDB_id=714954 NQZ91_RS07970 WP_257104952.1 1589109..1589534(+) (comGD/cglD) [Streptococcus suis strain DNS20]
MRKLKPLIQITNKAFTLLESLLVLFIVSFLALALSGSVQSAFRSVQETVFFWEFEELYKDSQRLAVNSQQEIHLQLTDIQ
LSNGHQSVQVPASIDVLTEQAIVFDKKGGNSSLAKLSFGARGKTVSYQLYIGSGRYKKSEK

Nucleotide

• Length: 426 bp

>NTDB_id=714954 NQZ91_RS07970 WP_257104952.1 1589109..1589534(+) (comGD/cglD) [Streptococcus suis strain DNS20]
ATGAGAAAGCTAAAGCCTCTAATCCAGATAACCAATAAAGCCTTTACTCTGCTAGAAAGTCTGTTGGTTCTTTTTATCGT
GAGCTTTCTTGCGCTGGCTTTGTCGGGTTCTGTCCAGTCGGCTTTTCGGTCGGTGCAGGAGACGGTTTTCTTCTGGGAGT
TTGAGGAGCTTTATAAGGATAGCCAGCGTCTGGCGGTCAACAGCCAGCAGGAAATTCATTTGCAACTGACGGATATCCAA
CTGTCCAACGGTCATCAGTCCGTGCAGGTGCCTGCTAGTATCGATGTACTGACTGAGCAGGCTATTGTTTTCGATAAAAA
AGGTGGGAATTCCTCGCTTGCCAAGCTGTCCTTTGGGGCGAGGGGCAAGACGGTGTCGTATCAATTATATATAGGGAGTG
GTCGTTATAAGAAATCGGAAAAATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	54.074	95.745	0.518
comGD/cglD	Streptococcus pneumoniae TIGR4	54.762	89.362	0.489
comGD/cglD	Streptococcus mitis SK321	53.968	89.362	0.482
comGD/cglD	Streptococcus pneumoniae Rx1	53.968	89.362	0.482
comGD/cglD	Streptococcus pneumoniae D39	53.968	89.362	0.482
comGD/cglD	Streptococcus pneumoniae R6	53.968	89.362	0.482
comYD	Streptococcus gordonii str. Challis substr. CH1	47.482	98.582	0.468
comYD	Streptococcus mutans UA140	48.062	91.489	0.44
comYD	Streptococcus mutans UA159	48.062	91.489	0.44