Detailed information NTG0714956

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: NQZ91_RS07980
• Genome accession: NZ_CP102145
• Coordinates: 1589762..1590220 (+)
• Length: 152 a.a.
• NCBI ID: WP_398599394.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DNS20
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1584762..1595220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ91_RS07945 (NQZ91_07945)	comX/sigX	1585899..1586369 (+)	471	WP_105110737.1	transcriptional regulator	Regulator
NQZ91_RS07950 (NQZ91_07950)	-	1586500..1586853 (+)	354	WP_105110736.1	DUF1033 family protein	-
NQZ91_RS07955 (NQZ91_07955)	comYA	1586947..1587897 (+)	951	WP_105110735.1	competence type IV pilus ATPase ComGA	Machinery gene
NQZ91_RS07960 (NQZ91_07960)	comYB	1587809..1588846 (+)	1038	WP_172068135.1	competence type IV pilus assembly protein ComGB	Machinery gene
NQZ91_RS07965 (NQZ91_07965)	comYC	1588847..1589146 (+)	300	WP_170243122.1	competence type IV pilus major pilin ComGC	Machinery gene
NQZ91_RS07970 (NQZ91_07970)	comGD/cglD	1589109..1589534 (+)	426	WP_257104952.1	competence type IV pilus minor pilin ComGD	Machinery gene
NQZ91_RS07975 (NQZ91_07975)	comYE	1589506..1589799 (+)	294	WP_105122988.1	competence type IV pilus minor pilin ComGE	Machinery gene
NQZ91_RS07980 (NQZ91_07980)	comYF	1589762..1590220 (+)	459	WP_398599394.1	competence type IV pilus minor pilin ComGF	Machinery gene
NQZ91_RS07985 (NQZ91_07985)	comGG	1590198..1590800 (+)	603	WP_257117307.1	competence type IV pilus minor pilin ComGG	-
NQZ91_RS07990 (NQZ91_07990)	comYH	1590851..1591804 (+)	954	WP_105122991.1	class I SAM-dependent methyltransferase	Machinery gene
NQZ91_RS07995 (NQZ91_07995)	-	1591854..1593041 (+)	1188	WP_257117308.1	acetate kinase	-
NQZ91_RS08000 (NQZ91_08000)	-	1593356..1593907 (+)	552	WP_125065555.1	folate family ECF transporter S component	-
NQZ91_RS08005 (NQZ91_08005)	-	1593963..1595219 (+)	1257	WP_257117310.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 152 a.a.
• Molecular weight: 17583.01 Da
• Isoelectric Point: 7.7069

>NTDB_id=714956 NQZ91_RS07980 WP_398599394.1 1589762..1590220(+) (comYF) [Streptococcus suis strain DNS20]
MREERWRVLRKTRCAAFTLLECLVALVIVSGSLLVFEGLSKLVVHEVRYQDQRVEKNWLLFCDQLRSEWEVASLDRVDAG
RIYIRQDGQALAFGKSRSDDFRKTNDRGQGYQPMLYGVKAASYSQSGQIVRLDVTFETGEERSFVYAFEEKG

Nucleotide

• Length: 459 bp

>NTDB_id=714956 NQZ91_RS07980 WP_398599394.1 1589762..1590220(+) (comYF) [Streptococcus suis strain DNS20]
ATGAGGGAAGAGAGGTGGCGCGTGTTGAGAAAAACTAGGTGTGCTGCCTTTACTCTTCTGGAATGTCTGGTGGCCTTGGT
CATCGTTTCAGGCAGTTTGCTGGTCTTTGAGGGCTTGTCAAAATTGGTGGTCCACGAAGTTCGCTACCAGGACCAGCGTG
TTGAGAAGAACTGGTTACTCTTCTGTGACCAGCTGCGCAGTGAATGGGAGGTGGCCAGTTTAGACAGAGTTGATGCGGGT
CGGATTTATATCAGGCAAGATGGTCAGGCCCTGGCCTTTGGCAAGTCACGGTCAGATGATTTTCGTAAGACCAATGACCG
GGGGCAGGGCTACCAGCCCATGCTTTACGGTGTCAAGGCGGCTAGCTATAGTCAATCTGGTCAGATTGTTCGATTGGATG
TGACGTTTGAAACTGGCGAGGAGAGGAGTTTCGTCTATGCTTTTGAAGAAAAAGGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (47-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA159	52.083	94.737	0.493
comYF	Streptococcus mutans UA140	51.389	94.737	0.487
comGF/cglF	Streptococcus mitis NCTC 12261	49.645	92.763	0.461
comGF/cglF	Streptococcus pneumoniae R6	48.592	93.421	0.454
comGF/cglF	Streptococcus pneumoniae TIGR4	48.592	93.421	0.454
comGF/cglF	Streptococcus pneumoniae Rx1	48.592	93.421	0.454
comGF/cglF	Streptococcus pneumoniae D39	48.592	93.421	0.454
comGF/cglF	Streptococcus mitis SK321	47.518	92.763	0.441
comGF	Lactococcus lactis subsp. cremoris KW2	42.857	92.105	0.395