Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | NLY77_RS00820 | Genome accession | NZ_CP100431 |
| Coordinates | 129410..130363 (+) | Length | 317 a.a. |
| NCBI ID | WP_024394706.1 | Uniprot ID | A0A0Z8SW51 |
| Organism | Streptococcus suis strain 1521251 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 124410..135363
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLY77_RS00780 (NLY77_00780) | - | 124673..125623 (-) | 951 | WP_024394700.1 | S66 peptidase family protein | - |
| NLY77_RS00785 (NLY77_00785) | comYA | 125709..126659 (+) | 951 | WP_014637312.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NLY77_RS00790 (NLY77_00790) | comYB | 126571..127608 (+) | 1038 | WP_043032925.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NLY77_RS00795 (NLY77_00795) | comYC | 127610..127891 (+) | 282 | WP_011921720.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NLY77_RS00800 (NLY77_00800) | comGD | 127872..128279 (+) | 408 | WP_024394702.1 | competence type IV pilus minor pilin ComGD | - |
| NLY77_RS00805 (NLY77_00805) | comYE | 128251..128544 (+) | 294 | WP_024394703.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| NLY77_RS00810 (NLY77_00810) | comGF/cglF | 128531..128965 (+) | 435 | WP_029750050.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NLY77_RS00815 (NLY77_00815) | comGG | 128943..129353 (+) | 411 | WP_024394705.1 | competence type IV pilus minor pilin ComGG | - |
| NLY77_RS00820 (NLY77_00820) | comYH | 129410..130363 (+) | 954 | WP_024394706.1 | class I SAM-dependent methyltransferase | Machinery gene |
| NLY77_RS00825 (NLY77_00825) | - | 130413..131600 (+) | 1188 | WP_014637319.1 | acetate kinase | - |
| NLY77_RS00830 (NLY77_00830) | - | 131915..132466 (+) | 552 | WP_014636756.1 | folate family ECF transporter S component | - |
| NLY77_RS00835 (NLY77_00835) | - | 132520..133776 (+) | 1257 | WP_172005964.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| NLY77_RS00840 (NLY77_00840) | pepA | 133821..134882 (-) | 1062 | WP_024394708.1 | glutamyl aminopeptidase | - |
| NLY77_RS00845 (NLY77_00845) | - | 135029..135313 (+) | 285 | WP_012774909.1 | DUF4651 domain-containing protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35744.84 Da Isoelectric Point: 4.5053
>NTDB_id=705245 NLY77_RS00820 WP_024394706.1 129410..130363(+) (comYH) [Streptococcus suis strain 1521251]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKNGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKNGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=705245 NLY77_RS00820 WP_024394706.1 129410..130363(+) (comYH) [Streptococcus suis strain 1521251]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAAATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTACCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCATTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAAATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTACCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCATTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.759 |
99.685 |
0.606 |
| comYH | Streptococcus mutans UA159 |
60.443 |
99.685 |
0.603 |