Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CHL1_RS00865 | Genome accession | NZ_CP097897 |
| Coordinates | 178268..179320 (+) | Length | 350 a.a. |
| NCBI ID | WP_250934373.1 | Uniprot ID | - |
| Organism | Acetobacterium wieringae strain CH1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 173268..184320
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHL1_RS00855 (CHL1_000171) | - | 174318..176540 (+) | 2223 | WP_250934371.1 | EAL domain-containing protein | - |
| CHL1_RS00860 (CHL1_000172) | - | 176571..178253 (+) | 1683 | WP_250934372.1 | GspE/PulE family protein | - |
| CHL1_RS00865 (CHL1_000173) | pilT | 178268..179320 (+) | 1053 | WP_250934373.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CHL1_RS00870 (CHL1_000174) | - | 180005..180517 (+) | 513 | WP_250934374.1 | type II secretion system protein | - |
| CHL1_RS00875 (CHL1_000175) | - | 180857..181255 (+) | 399 | WP_250934375.1 | hypothetical protein | - |
| CHL1_RS00880 (CHL1_000176) | - | 181274..182038 (+) | 765 | WP_250934376.1 | prepilin peptidase | - |
| CHL1_RS00885 (CHL1_000177) | - | 182069..183253 (+) | 1185 | WP_250934377.1 | type II secretion system F family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39031.47 Da Isoelectric Point: 6.6384
>NTDB_id=693467 CHL1_RS00865 WP_250934373.1 178268..179320(+) (pilT) [Acetobacterium wieringae strain CH1]
MRFLDLVNYGRRNDCSDIHLSRDLPPVFRKNGRLYQSDFEHNPQLIEQLIFSILTPAERKKLEDGSDLDFCHVTPEGLRQ
RVNIYKQQGSYAAAIRLLNDTIPSFEELKLPPIIRKLASEPRGLILITGPTGSGKSTTLASMIDYINVNRAVHILTIEDP
VEYKHTHKHSIVHQREIGVDANSFAAALRSSLREDPDVILVGEMRDYETVSAAVTAAETGHLVLSTLHTIGAANTIDRII
DVFSPHSQQQIRTQLSSILKGVVTQQLVPLADGSGRMAALEVLIGTDAVLNLIRENKTHQLASVMQTGGRDGMKTLNADL
AMLVRDQKISYEVGLEWASDKQEFNQYFGR
MRFLDLVNYGRRNDCSDIHLSRDLPPVFRKNGRLYQSDFEHNPQLIEQLIFSILTPAERKKLEDGSDLDFCHVTPEGLRQ
RVNIYKQQGSYAAAIRLLNDTIPSFEELKLPPIIRKLASEPRGLILITGPTGSGKSTTLASMIDYINVNRAVHILTIEDP
VEYKHTHKHSIVHQREIGVDANSFAAALRSSLREDPDVILVGEMRDYETVSAAVTAAETGHLVLSTLHTIGAANTIDRII
DVFSPHSQQQIRTQLSSILKGVVTQQLVPLADGSGRMAALEVLIGTDAVLNLIRENKTHQLASVMQTGGRDGMKTLNADL
AMLVRDQKISYEVGLEWASDKQEFNQYFGR
Nucleotide
Download Length: 1053 bp
>NTDB_id=693467 CHL1_RS00865 WP_250934373.1 178268..179320(+) (pilT) [Acetobacterium wieringae strain CH1]
ATGCGTTTTTTAGATCTGGTCAACTATGGTCGCCGCAACGATTGTTCAGACATTCATTTATCCCGGGACCTGCCCCCGGT
TTTTAGAAAAAACGGTCGCCTCTATCAGAGCGATTTTGAGCACAACCCGCAGCTGATCGAACAGCTGATTTTCAGCATTC
TGACCCCGGCGGAGCGCAAAAAGCTGGAAGATGGAAGTGACCTGGATTTTTGCCATGTTACCCCGGAAGGGCTGCGGCAA
CGGGTCAACATCTATAAACAGCAGGGCAGCTATGCCGCCGCCATCCGCCTCCTTAACGATACCATCCCCAGCTTTGAGGA
ACTCAAGCTGCCACCGATTATCCGCAAGCTGGCATCGGAGCCCCGGGGCCTGATTCTGATTACCGGGCCCACTGGCAGCG
GGAAATCCACCACCCTGGCTTCGATGATTGACTATATCAATGTCAACCGGGCGGTTCATATCTTAACCATAGAAGATCCG
GTGGAGTATAAGCATACCCACAAGCACAGCATTGTTCATCAGCGGGAAATCGGGGTCGATGCCAACTCCTTTGCCGCCGC
TTTGCGCTCGTCCCTGCGGGAAGACCCGGATGTTATTCTGGTGGGCGAAATGCGGGACTACGAAACGGTATCGGCCGCCG
TCACCGCGGCCGAAACCGGCCATCTGGTGCTGTCGACCCTCCATACCATCGGCGCTGCCAATACCATCGACCGGATCATT
GATGTCTTCTCCCCCCACAGCCAGCAGCAGATCCGCACCCAGCTGTCCAGCATTTTAAAAGGGGTTGTCACCCAGCAGCT
GGTGCCCCTGGCCGATGGTTCTGGTCGGATGGCCGCTCTGGAAGTCCTAATCGGTACCGATGCGGTGCTGAACTTGATCC
GTGAAAATAAAACCCACCAGCTGGCCTCGGTGATGCAAACCGGTGGCCGCGATGGCATGAAAACCCTCAATGCGGACCTG
GCCATGCTGGTTCGGGATCAGAAAATCAGCTACGAGGTCGGCCTTGAGTGGGCCAGTGATAAGCAGGAGTTTAATCAGTA
TTTTGGACGATAG
ATGCGTTTTTTAGATCTGGTCAACTATGGTCGCCGCAACGATTGTTCAGACATTCATTTATCCCGGGACCTGCCCCCGGT
TTTTAGAAAAAACGGTCGCCTCTATCAGAGCGATTTTGAGCACAACCCGCAGCTGATCGAACAGCTGATTTTCAGCATTC
TGACCCCGGCGGAGCGCAAAAAGCTGGAAGATGGAAGTGACCTGGATTTTTGCCATGTTACCCCGGAAGGGCTGCGGCAA
CGGGTCAACATCTATAAACAGCAGGGCAGCTATGCCGCCGCCATCCGCCTCCTTAACGATACCATCCCCAGCTTTGAGGA
ACTCAAGCTGCCACCGATTATCCGCAAGCTGGCATCGGAGCCCCGGGGCCTGATTCTGATTACCGGGCCCACTGGCAGCG
GGAAATCCACCACCCTGGCTTCGATGATTGACTATATCAATGTCAACCGGGCGGTTCATATCTTAACCATAGAAGATCCG
GTGGAGTATAAGCATACCCACAAGCACAGCATTGTTCATCAGCGGGAAATCGGGGTCGATGCCAACTCCTTTGCCGCCGC
TTTGCGCTCGTCCCTGCGGGAAGACCCGGATGTTATTCTGGTGGGCGAAATGCGGGACTACGAAACGGTATCGGCCGCCG
TCACCGCGGCCGAAACCGGCCATCTGGTGCTGTCGACCCTCCATACCATCGGCGCTGCCAATACCATCGACCGGATCATT
GATGTCTTCTCCCCCCACAGCCAGCAGCAGATCCGCACCCAGCTGTCCAGCATTTTAAAAGGGGTTGTCACCCAGCAGCT
GGTGCCCCTGGCCGATGGTTCTGGTCGGATGGCCGCTCTGGAAGTCCTAATCGGTACCGATGCGGTGCTGAACTTGATCC
GTGAAAATAAAACCCACCAGCTGGCCTCGGTGATGCAAACCGGTGGCCGCGATGGCATGAAAACCCTCAATGCGGACCTG
GCCATGCTGGTTCGGGATCAGAAAATCAGCTACGAGGTCGGCCTTGAGTGGGCCAGTGATAAGCAGGAGTTTAATCAGTA
TTTTGGACGATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.44 |
97.429 |
0.491 |
| pilT | Neisseria meningitidis 8013 |
47.11 |
98.857 |
0.466 |
| pilT | Legionella pneumophila strain ERS1305867 |
46.974 |
99.143 |
0.466 |
| pilT | Legionella pneumophila strain Lp02 |
46.974 |
99.143 |
0.466 |
| pilT | Neisseria gonorrhoeae MS11 |
46.532 |
98.857 |
0.46 |
| pilT | Pseudomonas aeruginosa PAK |
45.533 |
99.143 |
0.451 |
| pilT | Acinetobacter baylyi ADP1 |
44.957 |
99.143 |
0.446 |
| pilT | Pseudomonas stutzeri DSM 10701 |
44.957 |
99.143 |
0.446 |
| pilT | Acinetobacter baumannii strain A118 |
44.669 |
99.143 |
0.443 |
| pilT | Acinetobacter nosocomialis M2 |
44.669 |
99.143 |
0.443 |
| pilT | Acinetobacter baumannii D1279779 |
44.669 |
99.143 |
0.443 |
| pilT | Vibrio cholerae strain A1552 |
45.566 |
93.429 |
0.426 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.566 |
93.429 |
0.426 |
| pilU | Acinetobacter baylyi ADP1 |
40.588 |
97.143 |
0.394 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.466 |
96.286 |
0.38 |
| pilU | Vibrio cholerae strain A1552 |
39.506 |
92.571 |
0.366 |