Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LFL98_RS15340 Genome accession   NZ_CP110365
Coordinates   2947602..2948297 (-) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis strain HY2-62     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2942602..2953297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LFL98_RS15320 (LFL98_15325) yttA 2943029..2943775 (+) 747 WP_277736617.1 LMBR1 domain-containing protein -
  LFL98_RS15325 (LFL98_15330) bceB 2943812..2945752 (-) 1941 WP_277736618.1 bacitracin ABC transporter permease BceB -
  LFL98_RS15330 (LFL98_15335) bceA 2945742..2946503 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  LFL98_RS15335 (LFL98_15340) bceS 2946605..2947609 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  LFL98_RS15340 (LFL98_15345) braR 2947602..2948297 (-) 696 WP_004399109.1 two-component response regulator BceR Regulator
  LFL98_RS15345 (LFL98_15350) ytrF 2948394..2949704 (-) 1311 WP_004398682.1 ABC transporter permease YtrF -
  LFL98_RS15350 (LFL98_15355) ytrE 2949694..2950389 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  LFL98_RS15355 (LFL98_15360) ytrD 2950404..2951381 (-) 978 WP_103330158.1 ABC transporter permease YtrD -
  LFL98_RS15360 (LFL98_15365) - 2951413..2952399 (-) 987 WP_069964267.1 ABC transporter permease subunit -
  LFL98_RS15365 (LFL98_15370) ytrB 2952393..2953271 (-) 879 WP_172861258.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=684754 LFL98_RS15340 WP_004399109.1 2947602..2948297(-) (braR) [Bacillus subtilis strain HY2-62]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=684754 LFL98_RS15340 WP_004399109.1 2947602..2948297(-) (braR) [Bacillus subtilis strain HY2-62]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377