Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | GsYM18_RS02150 | Genome accession | NZ_AP017912 |
| Coordinates | 454136..455206 (+) | Length | 356 a.a. |
| NCBI ID | WP_010941105.1 | Uniprot ID | Q74G16 |
| Organism | Geobacter sulfurreducens strain YM18 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 449136..460206
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GsYM18_RS02140 (YM18_0420) | - | 451295..452299 (-) | 1005 | WP_119331689.1 | hypothetical protein | - |
| GsYM18_RS02145 (YM18_0421) | - | 452473..454122 (+) | 1650 | WP_119331690.1 | GspE/PulE family protein | - |
| GsYM18_RS02150 (YM18_0422) | pilT | 454136..455206 (+) | 1071 | WP_010941105.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GsYM18_RS02160 (YM18_0424) | - | 455589..457004 (+) | 1416 | WP_119334024.1 | UbiD family decarboxylase | - |
| GsYM18_RS02165 (YM18_0425) | - | 457004..457534 (+) | 531 | WP_119331691.1 | hypothetical protein | - |
| GsYM18_RS02170 (YM18_0426) | - | 457534..458430 (+) | 897 | WP_119334025.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| GsYM18_RS02175 (YM18_0427) | - | 458427..459050 (+) | 624 | WP_119331692.1 | UbiX family flavin prenyltransferase | - |
| GsYM18_RS02180 (YM18_0428) | mqnE | 459055..460140 (+) | 1086 | WP_119331693.1 | aminofutalosine synthase MqnE | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 39670.84 Da Isoelectric Point: 7.2650
>NTDB_id=68463 GsYM18_RS02150 WP_010941105.1 454136..455206(+) (pilT) [Geobacter sulfurreducens strain YM18]
MARIDALFKLLKEQGASDLHLSSGAPPIFRLHGEMARQNFKVLSHEELTAILYEILTDKQKADFEERRDLDFAYAIPGLA
RFRGNYMMTHRGIAAVFRIIPSKILSADDLSLPDGVRRMTQFKKGLVLVTGPTGSGKSTTLAAMIDLINATRKEHILTLE
DPLEFIHENKMSLLNQRQIGEHSLSFSAALRAALREDPDVILVGEMRDLETIGLAMSAAETGHLVFGTLHTNSAAKTIDR
IIDVFPTDQQEQTRAMLSESLKGVVCQQLLKTADGKGRVAALEIMLGTPAIANLIREGKTFQIPSIIQTAKRDGMQLMDQ
HLLDLFKTKRITAEEAYRCAQDKKQFEQYLTEKPGQ
MARIDALFKLLKEQGASDLHLSSGAPPIFRLHGEMARQNFKVLSHEELTAILYEILTDKQKADFEERRDLDFAYAIPGLA
RFRGNYMMTHRGIAAVFRIIPSKILSADDLSLPDGVRRMTQFKKGLVLVTGPTGSGKSTTLAAMIDLINATRKEHILTLE
DPLEFIHENKMSLLNQRQIGEHSLSFSAALRAALREDPDVILVGEMRDLETIGLAMSAAETGHLVFGTLHTNSAAKTIDR
IIDVFPTDQQEQTRAMLSESLKGVVCQQLLKTADGKGRVAALEIMLGTPAIANLIREGKTFQIPSIIQTAKRDGMQLMDQ
HLLDLFKTKRITAEEAYRCAQDKKQFEQYLTEKPGQ
Nucleotide
Download Length: 1071 bp
>NTDB_id=68463 GsYM18_RS02150 WP_010941105.1 454136..455206(+) (pilT) [Geobacter sulfurreducens strain YM18]
ATGGCACGTATCGACGCACTGTTCAAGCTGCTGAAGGAGCAGGGGGCCTCCGACCTCCACCTGTCGTCGGGAGCTCCGCC
CATTTTCAGGCTCCACGGAGAGATGGCGCGGCAGAACTTCAAAGTTCTCTCCCACGAGGAACTGACGGCCATCCTCTACG
AAATCCTGACCGACAAGCAGAAGGCCGATTTCGAGGAGCGGCGGGACCTGGACTTCGCCTATGCCATTCCCGGCCTGGCC
CGGTTCCGGGGGAACTACATGATGACCCACCGGGGCATCGCCGCGGTCTTCCGGATCATCCCCAGCAAGATCCTCTCGGC
AGACGACCTGAGCCTTCCCGACGGGGTCCGCCGTATGACCCAGTTCAAGAAGGGGCTCGTGCTGGTCACCGGCCCCACGG
GGTCGGGCAAGTCCACCACCCTTGCCGCAATGATCGATCTCATCAACGCCACCCGCAAGGAGCATATCCTCACCCTGGAA
GACCCTCTCGAATTCATCCACGAGAACAAAATGTCACTCCTGAACCAGCGGCAGATCGGCGAGCACTCCCTGAGTTTTTC
CGCCGCCCTGCGCGCCGCCCTGCGGGAGGACCCCGACGTTATCCTCGTGGGCGAGATGCGGGACCTGGAGACCATAGGCC
TCGCCATGAGCGCCGCCGAGACCGGCCACCTGGTCTTCGGCACCCTCCATACCAATTCGGCGGCCAAGACCATCGACCGG
ATCATCGATGTCTTTCCCACCGATCAGCAGGAGCAGACCCGGGCCATGCTCTCCGAATCTCTCAAAGGGGTCGTCTGCCA
GCAGCTTCTCAAAACCGCCGACGGCAAGGGGCGGGTCGCGGCGCTAGAGATCATGCTCGGCACCCCGGCCATCGCCAACC
TGATCAGGGAGGGGAAAACCTTCCAGATCCCCTCCATCATCCAGACTGCCAAGCGTGACGGCATGCAGCTCATGGACCAG
CACCTGCTGGACCTCTTCAAGACCAAGCGGATCACCGCCGAGGAGGCCTACCGCTGTGCCCAGGACAAGAAGCAGTTCGA
GCAGTACCTGACGGAGAAGCCGGGGCAGTAG
ATGGCACGTATCGACGCACTGTTCAAGCTGCTGAAGGAGCAGGGGGCCTCCGACCTCCACCTGTCGTCGGGAGCTCCGCC
CATTTTCAGGCTCCACGGAGAGATGGCGCGGCAGAACTTCAAAGTTCTCTCCCACGAGGAACTGACGGCCATCCTCTACG
AAATCCTGACCGACAAGCAGAAGGCCGATTTCGAGGAGCGGCGGGACCTGGACTTCGCCTATGCCATTCCCGGCCTGGCC
CGGTTCCGGGGGAACTACATGATGACCCACCGGGGCATCGCCGCGGTCTTCCGGATCATCCCCAGCAAGATCCTCTCGGC
AGACGACCTGAGCCTTCCCGACGGGGTCCGCCGTATGACCCAGTTCAAGAAGGGGCTCGTGCTGGTCACCGGCCCCACGG
GGTCGGGCAAGTCCACCACCCTTGCCGCAATGATCGATCTCATCAACGCCACCCGCAAGGAGCATATCCTCACCCTGGAA
GACCCTCTCGAATTCATCCACGAGAACAAAATGTCACTCCTGAACCAGCGGCAGATCGGCGAGCACTCCCTGAGTTTTTC
CGCCGCCCTGCGCGCCGCCCTGCGGGAGGACCCCGACGTTATCCTCGTGGGCGAGATGCGGGACCTGGAGACCATAGGCC
TCGCCATGAGCGCCGCCGAGACCGGCCACCTGGTCTTCGGCACCCTCCATACCAATTCGGCGGCCAAGACCATCGACCGG
ATCATCGATGTCTTTCCCACCGATCAGCAGGAGCAGACCCGGGCCATGCTCTCCGAATCTCTCAAAGGGGTCGTCTGCCA
GCAGCTTCTCAAAACCGCCGACGGCAAGGGGCGGGTCGCGGCGCTAGAGATCATGCTCGGCACCCCGGCCATCGCCAACC
TGATCAGGGAGGGGAAAACCTTCCAGATCCCCTCCATCATCCAGACTGCCAAGCGTGACGGCATGCAGCTCATGGACCAG
CACCTGCTGGACCTCTTCAAGACCAAGCGGATCACCGCCGAGGAGGCCTACCGCTGTGCCCAGGACAAGAAGCAGTTCGA
GCAGTACCTGACGGAGAAGCCGGGGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
58.308 |
92.978 |
0.542 |
| pilT | Legionella pneumophila strain Lp02 |
58.308 |
92.978 |
0.542 |
| pilT | Pseudomonas stutzeri DSM 10701 |
56.268 |
96.348 |
0.542 |
| pilT | Pseudomonas aeruginosa PAK |
55.685 |
96.348 |
0.537 |
| pilT | Acinetobacter baylyi ADP1 |
55.394 |
96.348 |
0.534 |
| pilT | Acinetobacter baumannii strain A118 |
54.519 |
96.348 |
0.525 |
| pilT | Acinetobacter nosocomialis M2 |
54.519 |
96.348 |
0.525 |
| pilT | Acinetobacter baumannii D1279779 |
54.519 |
96.348 |
0.525 |
| pilT | Neisseria gonorrhoeae MS11 |
54.678 |
96.067 |
0.525 |
| pilT | Neisseria meningitidis 8013 |
54.678 |
96.067 |
0.525 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.061 |
96.348 |
0.511 |
| pilT | Vibrio cholerae strain A1552 |
53.012 |
93.258 |
0.494 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
53.012 |
93.258 |
0.494 |
| pilU | Vibrio cholerae strain A1552 |
40.294 |
95.506 |
0.385 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.06 |
93.258 |
0.374 |
| pilU | Acinetobacter baylyi ADP1 |
38.806 |
94.101 |
0.365 |