Detailed information NTG0067960

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JLE48_RS21480
• Genome accession: NZ_AP022482
• Coordinates: 4509052..4510077 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain STN0717-20
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4504052..4515077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JLE48_RS21470 (STN0717ESC20_41940)	rpmE	4506283..4506495 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
JLE48_RS21475 (STN0717ESC20_41950)	priA	4506698..4508896 (+)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
JLE48_RS21480 (STN0717ESC20_41960)	cytR	4509052..4510077 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JLE48_RS21485 (STN0717ESC20_41970)	ftsN	4510169..4511128 (+)	960	WP_000068834.1	cell division protein FtsN	-
JLE48_RS21490 (STN0717ESC20_41980)	hslV	4511221..4511751 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JLE48_RS21495 (STN0717ESC20_41990)	hslU	4511761..4513092 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
JLE48_RS21500 (STN0717ESC20_42000)	menA	4513159..4514085 (+)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JLE48_RS21505 (STN0717ESC20_42010)	rraA	4514178..4514663 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JLE48_RS21510 (STN0717ESC20_42020)	zapB	4514748..4514993 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=67960 JLE48_RS21480 WP_000644904.1 4509052..4510077(+) (cytR) [Escherichia coli strain STN0717-20]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=67960 JLE48_RS21480 WP_000644904.1 4509052..4510077(+) (cytR) [Escherichia coli strain STN0717-20]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628