Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | IEQ11_RS05700 | Genome accession | NZ_CP094357 |
| Coordinates | 1414706..1415743 (+) | Length | 345 a.a. |
| NCBI ID | WP_036109068.1 | Uniprot ID | A0A108U802 |
| Organism | Lysobacter capsici strain VKM B-2533 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1409706..1420743
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEQ11_RS05675 (IEQ11_05675) | - | 1410470..1411489 (+) | 1020 | Protein_1119 | lipase secretion chaperone | - |
| IEQ11_RS05680 (IEQ11_05680) | - | 1411686..1412159 (-) | 474 | WP_082124157.1 | DUF4426 domain-containing protein | - |
| IEQ11_RS05685 (IEQ11_05685) | proC | 1412156..1412992 (-) | 837 | WP_057920929.1 | pyrroline-5-carboxylate reductase | - |
| IEQ11_RS05690 (IEQ11_05690) | - | 1413202..1413696 (+) | 495 | WP_191823487.1 | hypothetical protein | - |
| IEQ11_RS05695 (IEQ11_05695) | - | 1413829..1414530 (-) | 702 | WP_247024731.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| IEQ11_RS05700 (IEQ11_05700) | pilT | 1414706..1415743 (+) | 1038 | WP_036109068.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| IEQ11_RS05705 (IEQ11_05705) | pilU | 1415849..1417015 (+) | 1167 | WP_046655750.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38546.39 Da Isoelectric Point: 6.7270
>NTDB_id=669211 IEQ11_RS05700 WP_036109068.1 1414706..1415743(+) (pilT) [Lysobacter capsici strain VKM B-2533]
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDFEEFLEVDFSFEIPGLAR
FRVNAFNQNRGAGAVFRTIPSEVLTLEDLGCPPIFRQLIEQPQGLILVTGPTGSGKSTTLAAMIDHINKNEYAHILSVED
PIEFVHTSQKCLINQREIHRDTHGFNEALRSALREDPDYILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRI
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGIPAIRNLIREDKVAQMYSAIQTGQGYGMMTLDQHL
QDLVKRGMILRPQAREYAKDKRLFD
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDFEEFLEVDFSFEIPGLAR
FRVNAFNQNRGAGAVFRTIPSEVLTLEDLGCPPIFRQLIEQPQGLILVTGPTGSGKSTTLAAMIDHINKNEYAHILSVED
PIEFVHTSQKCLINQREIHRDTHGFNEALRSALREDPDYILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRI
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGIPAIRNLIREDKVAQMYSAIQTGQGYGMMTLDQHL
QDLVKRGMILRPQAREYAKDKRLFD
Nucleotide
Download Length: 1038 bp
>NTDB_id=669211 IEQ11_RS05700 WP_036109068.1 1414706..1415743(+) (pilT) [Lysobacter capsici strain VKM B-2533]
ATGGATATCGCCGAACTACTGGCGTTCTCGGTTAAGAACAAAGCATCCGACTTGCATCTGTCCGCGGGCCTGCCGCCGAT
GATCCGGGTCGATGGCGACGTGCGCCGGATCAACATCCCGGCCCTGGACCACAAACAGGTCCATGCGCTGGTCTACGACA
TCATGTCGGACAAGCAGCGGCGCGACTTCGAAGAATTCCTCGAGGTCGACTTCTCCTTCGAAATCCCCGGCCTGGCGCGC
TTCCGCGTCAACGCCTTCAACCAGAACCGCGGCGCCGGCGCCGTGTTCCGTACCATTCCCTCCGAAGTGCTGACCCTGGA
AGACCTCGGCTGCCCGCCGATCTTCCGTCAGCTCATCGAACAGCCGCAGGGCCTGATCCTGGTGACCGGGCCGACCGGCT
CGGGCAAGTCGACCACGCTCGCGGCGATGATCGACCACATCAACAAGAACGAGTACGCGCACATCCTGTCGGTGGAAGAC
CCGATCGAGTTCGTGCACACCTCGCAGAAGTGTCTGATCAACCAGCGCGAAATCCACCGCGACACCCACGGGTTCAACGA
GGCCTTGCGCTCGGCGTTGCGCGAAGACCCCGACTACATCCTGGTCGGCGAGTTGCGCGACCTGGAAACCATCCGCCTGG
CGCTGACCGCGGCGGAAACCGGCCACTTGGTGTTCGGCACCCTGCACACCTCGTCGGCGGCCAAGACCGTCGACCGCATC
ATCGACGTGTTCCCCGCCGGCGAAAAGCCGATGGTGCGCTCGATGCTGTCGGAATCGCTGCGCGCGGTGATTTCGCAGGC
GCTGCTCAAGAAGGTCGGCGGCGGCCGTACCGCGGCCTGGGAAATCATGGTCGGCATCCCGGCAATCCGAAACCTCATCC
GCGAGGACAAGGTCGCGCAGATGTATTCGGCCATCCAGACCGGCCAGGGCTACGGCATGATGACGCTCGATCAGCATCTG
CAGGACCTGGTCAAGCGCGGCATGATCCTGCGCCCGCAGGCGCGCGAGTACGCGAAGGACAAGCGCCTGTTCGACTGA
ATGGATATCGCCGAACTACTGGCGTTCTCGGTTAAGAACAAAGCATCCGACTTGCATCTGTCCGCGGGCCTGCCGCCGAT
GATCCGGGTCGATGGCGACGTGCGCCGGATCAACATCCCGGCCCTGGACCACAAACAGGTCCATGCGCTGGTCTACGACA
TCATGTCGGACAAGCAGCGGCGCGACTTCGAAGAATTCCTCGAGGTCGACTTCTCCTTCGAAATCCCCGGCCTGGCGCGC
TTCCGCGTCAACGCCTTCAACCAGAACCGCGGCGCCGGCGCCGTGTTCCGTACCATTCCCTCCGAAGTGCTGACCCTGGA
AGACCTCGGCTGCCCGCCGATCTTCCGTCAGCTCATCGAACAGCCGCAGGGCCTGATCCTGGTGACCGGGCCGACCGGCT
CGGGCAAGTCGACCACGCTCGCGGCGATGATCGACCACATCAACAAGAACGAGTACGCGCACATCCTGTCGGTGGAAGAC
CCGATCGAGTTCGTGCACACCTCGCAGAAGTGTCTGATCAACCAGCGCGAAATCCACCGCGACACCCACGGGTTCAACGA
GGCCTTGCGCTCGGCGTTGCGCGAAGACCCCGACTACATCCTGGTCGGCGAGTTGCGCGACCTGGAAACCATCCGCCTGG
CGCTGACCGCGGCGGAAACCGGCCACTTGGTGTTCGGCACCCTGCACACCTCGTCGGCGGCCAAGACCGTCGACCGCATC
ATCGACGTGTTCCCCGCCGGCGAAAAGCCGATGGTGCGCTCGATGCTGTCGGAATCGCTGCGCGCGGTGATTTCGCAGGC
GCTGCTCAAGAAGGTCGGCGGCGGCCGTACCGCGGCCTGGGAAATCATGGTCGGCATCCCGGCAATCCGAAACCTCATCC
GCGAGGACAAGGTCGCGCAGATGTATTCGGCCATCCAGACCGGCCAGGGCTACGGCATGATGACGCTCGATCAGCATCTG
CAGGACCTGGTCAAGCGCGGCATGATCCTGCGCCCGCAGGCGCGCGAGTACGCGAAGGACAAGCGCCTGTTCGACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
79.07 |
99.71 |
0.788 |
| pilT | Acinetobacter baumannii D1279779 |
79.07 |
99.71 |
0.788 |
| pilT | Acinetobacter baumannii strain A118 |
79.07 |
99.71 |
0.788 |
| pilT | Acinetobacter baylyi ADP1 |
77.616 |
99.71 |
0.774 |
| pilT | Pseudomonas stutzeri DSM 10701 |
77.616 |
99.71 |
0.774 |
| pilT | Pseudomonas aeruginosa PAK |
77.876 |
98.261 |
0.765 |
| pilT | Legionella pneumophila strain Lp02 |
73.256 |
99.71 |
0.73 |
| pilT | Legionella pneumophila strain ERS1305867 |
73.256 |
99.71 |
0.73 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
69.605 |
95.362 |
0.664 |
| pilT | Vibrio cholerae strain A1552 |
69.605 |
95.362 |
0.664 |
| pilT | Neisseria meningitidis 8013 |
65.789 |
99.13 |
0.652 |
| pilT | Neisseria gonorrhoeae MS11 |
65.497 |
99.13 |
0.649 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.986 |
100 |
0.49 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.413 |
98.261 |
0.397 |
| pilU | Acinetobacter baylyi ADP1 |
39.412 |
98.551 |
0.388 |
| pilU | Vibrio cholerae strain A1552 |
40.308 |
94.203 |
0.38 |