Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilT   Type   Machinery gene
Locus tag   MOV10_RS03875 Genome accession   NZ_CP093445
Coordinates   808093..809073 (+) Length   326 a.a.
NCBI ID   WP_242105710.1    Uniprot ID   A0A8T9IL27
Organism   Salmonella enterica subsp. enterica serovar Abeokuta strain OG19FER4     
Function   type IV pilus retraction (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 803093..814073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOV10_RS03845 (MOV10_03845) - 803671..804678 (+) 1008 WP_079983848.1 DUF1202 domain-containing protein -
  MOV10_RS03850 (MOV10_03850) hemW 804769..805905 (-) 1137 WP_140236154.1 radical SAM family heme chaperone HemW -
  MOV10_RS03855 (MOV10_03855) - 805898..806491 (-) 594 WP_063808830.1 XTP/dITP diphosphatase -
  MOV10_RS03860 (MOV10_03860) yggU 806499..806789 (-) 291 WP_001277203.1 DUF167 family protein YggU -
  MOV10_RS03865 (MOV10_03865) - 806786..807352 (-) 567 WP_001094848.1 YggT family protein -
  MOV10_RS03870 (MOV10_03870) - 807371..808075 (-) 705 WP_000997812.1 YggS family pyridoxal phosphate-dependent enzyme -
  MOV10_RS03875 (MOV10_03875) pilT 808093..809073 (+) 981 WP_242105710.1 type IV pilus twitching motility protein PilT Machinery gene
  MOV10_RS03880 (MOV10_03880) - 809205..809891 (+) 687 WP_242105711.1 IclR family transcriptional regulator -
  MOV10_RS03885 (MOV10_03885) ruvX 809938..810354 (-) 417 WP_000017096.1 Holliday junction resolvase RuvX -
  MOV10_RS03890 (MOV10_03890) - 810354..810917 (-) 564 WP_001053173.1 YqgE/AlgH family protein -
  MOV10_RS03895 (MOV10_03895) gshB 811133..812080 (-) 948 WP_023232636.1 glutathione synthase -
  MOV10_RS03900 (MOV10_03900) rsmE 812100..812831 (-) 732 WP_001675718.1 16S rRNA (uracil(1498)-N(3))-methyltransferase -
  MOV10_RS03905 (MOV10_03905) endA 812908..813615 (-) 708 WP_000286124.1 deoxyribonuclease I -

Sequence

Protein


Download         Length: 326 a.a.        Molecular weight: 36139.35 Da        Isoelectric Point: 7.8163

>NTDB_id=664691 MOV10_RS03875 WP_242105710.1 808093..809073(+) (pilT) [Salmonella enterica subsp. enterica serovar Abeokuta strain OG19FER4]
MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMEKAPFTAPDVDRLLLDWLNDAQQYQWRTHGQLDFAVSLSGTRRLRA
SAFTHQQGTSLALRLLPERCPDLAEIQTPPIVPALLASENGLILVTGATGCGKSTTLAAMVGHLNQHADKHILTLEDPIE
YRYTSKRCLIQQREIGQHCATFAAGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKEPVRSQLAGSLRAVLSQKLEVDRQDGRVALFELLINTPATGNLIREGKLHQLAHVIQTGQQQGMMTFAQSAQWR
QAQGRL

Nucleotide


Download         Length: 981 bp        

>NTDB_id=664691 MOV10_RS03875 WP_242105710.1 808093..809073(+) (pilT) [Salmonella enterica subsp. enterica serovar Abeokuta strain OG19FER4]
ATGAATATGGAAGAAATTGTGACGCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGTAACGCCTGGCCTGCGCG
ATGGCGCAAACAAGGACGCATGGAGAAAGCGCCTTTTACCGCGCCTGATGTCGACAGGCTTCTGCTTGATTGGCTTAATG
ATGCGCAACAATATCAGTGGCGAACGCACGGCCAGCTTGATTTCGCCGTCTCGCTGTCTGGCACGCGGCGCCTGCGCGCC
AGTGCGTTCACACATCAACAGGGAACGTCGCTGGCGCTACGGCTATTGCCCGAGCGTTGTCCTGATCTGGCGGAAATCCA
GACGCCGCCGATAGTACCCGCACTGCTTGCCAGCGAGAACGGACTGATTCTGGTCACTGGCGCTACTGGCTGCGGGAAGT
CCACTACGCTGGCGGCGATGGTGGGACATCTTAATCAACATGCCGATAAACACATCCTGACGCTGGAAGATCCTATTGAG
TACCGTTACACCAGCAAGCGTTGCCTGATACAGCAGCGGGAAATCGGCCAGCATTGCGCCACTTTTGCCGCCGGGCTGCG
CGCGGCGTTACGTGAAGATCCCGATGTCATTTTGCTGGGGGAGCTGCGTGACAGCGAGACCATTCGCCTGGCGCTGACGG
CGGCGGAAACGGGGCATCTGGTACTGGCAACCCTGCATACTCGCGGTGCGGCGCAGGCGGTGGAAAGATTAGTGGATAGT
TTTCCGGCGCAGGAAAAAGAACCGGTACGCAGTCAACTGGCGGGTAGTCTGCGCGCTGTACTATCGCAAAAACTGGAGGT
CGACAGACAGGATGGGCGCGTGGCGTTGTTTGAATTACTGATTAATACGCCAGCCACAGGGAATTTGATCCGTGAAGGCA
AACTCCATCAGTTGGCCCACGTGATACAAACCGGGCAGCAGCAGGGGATGATGACATTCGCCCAGAGCGCGCAATGGCGT
CAGGCGCAGGGACGACTGTAG

Domains

Predicted by InterproScan.

Type II/IV secretion system protein (T2SSE)

(76-239)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilT Vibrio cholerae O1 biovar El Tor strain E7946

48.93

100

0.491
  pilT Vibrio cholerae strain A1552

48.93

100

0.491
  pilT Neisseria meningitidis 8013

47.256

100

0.475
  pilT Neisseria gonorrhoeae MS11

46.951

100

0.472
  pilT Acinetobacter baylyi ADP1

45.26

100

0.454
  pilT Pseudomonas stutzeri DSM 10701

44.954

100

0.451
  pilT Acinetobacter baumannii D1279779

44.954

100

0.451
  pilT Acinetobacter baumannii strain A118

44.954

100

0.451
  pilT Pseudomonas aeruginosa PAK

44.954

100

0.451
  pilT Acinetobacter nosocomialis M2

44.648

100

0.448
  pilT Legionella pneumophila strain ERS1305867

44.969

97.546

0.439
  pilT Legionella pneumophila strain Lp02

44.969

97.546

0.439
  pilT Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

42.138

97.546

0.411
  pilU Vibrio cholerae strain A1552

38.558

97.853

0.377
  pilU Pseudomonas stutzeri DSM 10701

35.952

100

0.365
  pilU Acinetobacter baylyi ADP1

36.842

99.08

0.365