Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | MBG98_RS11800 | Genome accession | NZ_CP092038 |
| Coordinates | 2642075..2643196 (-) | Length | 373 a.a. |
| NCBI ID | WP_010948029.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain 11052018-5 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2637075..2648196
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MBG98_RS11785 (MBG98_11785) | - | 2637957..2638394 (-) | 438 | WP_015444141.1 | hypothetical protein | - |
| MBG98_RS11790 (MBG98_11790) | - | 2638675..2639970 (+) | 1296 | WP_014842281.1 | serine/threonine transporter | - |
| MBG98_RS11795 (MBG98_11795) | ankK | 2640063..2641988 (-) | 1926 | WP_010948028.1 | Dot/Icm T4SS effector AnkK/LegA5 | - |
| MBG98_RS11800 (MBG98_11800) | pilU | 2642075..2643196 (-) | 1122 | WP_010948029.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| MBG98_RS11805 (MBG98_11805) | - | 2643286..2645214 (-) | 1929 | WP_010948030.1 | FAD-binding oxidoreductase | - |
| MBG98_RS11810 (MBG98_11810) | - | 2645502..2646338 (-) | 837 | WP_010948031.1 | phytanoyl-CoA dioxygenase family protein | - |
| MBG98_RS11815 (MBG98_11815) | radA | 2646335..2647690 (-) | 1356 | WP_025862411.1 | DNA repair protein RadA | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41657.90 Da Isoelectric Point: 5.2999
>NTDB_id=655307 MBG98_RS11800 WP_010948029.1 2642075..2643196(-) (pilU) [Legionella pneumophila strain 11052018-5]
MDITPFFKLMVDKGASDLFFSVGAPPNIKIEGITSPIGQVPIKSNQMAEIVLSIMNDAQQKEFESKMELNMAFSLAGVGR
FRINLFRQRGEVAMVVRYIKGEIPSIEDLNLPQILKSLVLELRGLVLVVGSTGSGKSTTLAAMINHRNENHRGHILTIED
PIEYIHQHKKSIVDQREIGIDTLSYDNALKNAMREAPDVILIGEIRDLNSMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPDEARQQILLDLSLNLKAIISLRLIPGVDNQRVAAVEILINSPYISDLIEKGKIDDIKEVMARSAEQGMQTFDQAL
FNLYKEGKITKENAIKYADSKNNVGLQIRLGEEKSFNIQDENLQIQPDDIDNV
MDITPFFKLMVDKGASDLFFSVGAPPNIKIEGITSPIGQVPIKSNQMAEIVLSIMNDAQQKEFESKMELNMAFSLAGVGR
FRINLFRQRGEVAMVVRYIKGEIPSIEDLNLPQILKSLVLELRGLVLVVGSTGSGKSTTLAAMINHRNENHRGHILTIED
PIEYIHQHKKSIVDQREIGIDTLSYDNALKNAMREAPDVILIGEIRDLNSMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPDEARQQILLDLSLNLKAIISLRLIPGVDNQRVAAVEILINSPYISDLIEKGKIDDIKEVMARSAEQGMQTFDQAL
FNLYKEGKITKENAIKYADSKNNVGLQIRLGEEKSFNIQDENLQIQPDDIDNV
Nucleotide
Download Length: 1122 bp
>NTDB_id=655307 MBG98_RS11800 WP_010948029.1 2642075..2643196(-) (pilU) [Legionella pneumophila strain 11052018-5]
ATGGATATTACTCCTTTTTTTAAGCTCATGGTCGATAAAGGTGCCTCAGATTTGTTTTTCAGTGTCGGGGCACCACCAAA
TATTAAAATCGAGGGCATCACATCACCTATTGGCCAGGTTCCTATCAAATCGAATCAAATGGCAGAAATTGTTTTATCTA
TTATGAATGACGCACAGCAAAAAGAATTTGAGTCTAAAATGGAACTCAATATGGCTTTTTCATTAGCTGGAGTAGGGCGT
TTCCGAATCAATTTATTCAGGCAACGTGGCGAAGTGGCTATGGTGGTGCGTTACATCAAGGGCGAAATACCTTCTATAGA
AGATTTAAATCTTCCTCAAATTTTAAAGTCTCTGGTCTTGGAGCTGCGTGGTTTAGTATTGGTTGTTGGGTCCACGGGAT
CGGGTAAATCAACGACTCTGGCCGCGATGATCAACCACCGTAATGAAAATCACAGAGGGCATATTTTAACAATAGAGGAT
CCTATTGAATATATACATCAACATAAAAAATCAATAGTTGATCAACGAGAGATAGGTATTGATACTCTAAGCTATGACAA
TGCATTGAAAAACGCGATGAGAGAAGCGCCTGATGTGATATTAATTGGTGAAATTCGTGATCTTAACTCAATGAAACATG
CGATAGCTTATGCTGAAACAGGACATTTGTGCATTTCTACTTTGCATGCCAATAACGCCAATCAGGCTCTGGATAGAGTG
ATTAATTTTTTCCCCGATGAGGCAAGACAACAGATATTATTAGATTTATCTCTTAATTTAAAAGCAATCATTTCATTACG
TTTGATACCAGGAGTTGATAATCAACGTGTCGCAGCGGTGGAGATCTTGATTAACTCTCCTTACATTTCCGATTTGATTG
AAAAAGGGAAGATAGACGATATTAAAGAAGTCATGGCAAGAAGCGCGGAACAAGGCATGCAGACTTTCGATCAGGCTTTA
TTTAATTTATATAAAGAAGGAAAAATTACCAAAGAAAATGCGATTAAGTATGCTGATTCAAAAAACAATGTGGGTTTACA
AATTCGATTGGGCGAAGAAAAAAGCTTTAATATTCAAGATGAGAATTTACAAATACAACCCGATGATATTGATAATGTTT
GA
ATGGATATTACTCCTTTTTTTAAGCTCATGGTCGATAAAGGTGCCTCAGATTTGTTTTTCAGTGTCGGGGCACCACCAAA
TATTAAAATCGAGGGCATCACATCACCTATTGGCCAGGTTCCTATCAAATCGAATCAAATGGCAGAAATTGTTTTATCTA
TTATGAATGACGCACAGCAAAAAGAATTTGAGTCTAAAATGGAACTCAATATGGCTTTTTCATTAGCTGGAGTAGGGCGT
TTCCGAATCAATTTATTCAGGCAACGTGGCGAAGTGGCTATGGTGGTGCGTTACATCAAGGGCGAAATACCTTCTATAGA
AGATTTAAATCTTCCTCAAATTTTAAAGTCTCTGGTCTTGGAGCTGCGTGGTTTAGTATTGGTTGTTGGGTCCACGGGAT
CGGGTAAATCAACGACTCTGGCCGCGATGATCAACCACCGTAATGAAAATCACAGAGGGCATATTTTAACAATAGAGGAT
CCTATTGAATATATACATCAACATAAAAAATCAATAGTTGATCAACGAGAGATAGGTATTGATACTCTAAGCTATGACAA
TGCATTGAAAAACGCGATGAGAGAAGCGCCTGATGTGATATTAATTGGTGAAATTCGTGATCTTAACTCAATGAAACATG
CGATAGCTTATGCTGAAACAGGACATTTGTGCATTTCTACTTTGCATGCCAATAACGCCAATCAGGCTCTGGATAGAGTG
ATTAATTTTTTCCCCGATGAGGCAAGACAACAGATATTATTAGATTTATCTCTTAATTTAAAAGCAATCATTTCATTACG
TTTGATACCAGGAGTTGATAATCAACGTGTCGCAGCGGTGGAGATCTTGATTAACTCTCCTTACATTTCCGATTTGATTG
AAAAAGGGAAGATAGACGATATTAAAGAAGTCATGGCAAGAAGCGCGGAACAAGGCATGCAGACTTTCGATCAGGCTTTA
TTTAATTTATATAAAGAAGGAAAAATTACCAAAGAAAATGCGATTAAGTATGCTGATTCAAAAAACAATGTGGGTTTACA
AATTCGATTGGGCGAAGAAAAAAGCTTTAATATTCAAGATGAGAATTTACAAATACAACCCGATGATATTGATAATGTTT
GA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
55.085 |
94.906 |
0.523 |
| pilU | Acinetobacter baylyi ADP1 |
52.958 |
95.174 |
0.504 |
| pilU | Vibrio cholerae strain A1552 |
48.286 |
93.834 |
0.453 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.723 |
90.885 |
0.416 |
| pilT | Legionella pneumophila strain Lp02 |
43.275 |
91.689 |
0.397 |
| pilT | Legionella pneumophila strain ERS1305867 |
43.275 |
91.689 |
0.397 |
| pilT | Neisseria meningitidis 8013 |
42.363 |
93.029 |
0.394 |
| pilT | Neisseria gonorrhoeae MS11 |
42.363 |
93.029 |
0.394 |
| pilT | Pseudomonas aeruginosa PAK |
42.566 |
91.957 |
0.391 |
| pilT | Acinetobacter baumannii D1279779 |
43.413 |
89.544 |
0.389 |
| pilT | Acinetobacter nosocomialis M2 |
43.413 |
89.544 |
0.389 |
| pilT | Acinetobacter baumannii strain A118 |
43.413 |
89.544 |
0.389 |
| pilT | Pseudomonas stutzeri DSM 10701 |
41.983 |
91.957 |
0.386 |
| pilT | Acinetobacter baylyi ADP1 |
41.176 |
91.153 |
0.375 |
| pilT | Vibrio cholerae strain A1552 |
42.249 |
88.204 |
0.373 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.249 |
88.204 |
0.373 |