Detailed information NTG0651089

Bioinformatically predicted

Overview

• Name: pilA/pilA1
• Type: Machinery gene
• Locus tag: LZ558_RS04480
• Genome accession: NZ_CP091424
• Coordinates: 993286..993705 (-)
• Length: 139 a.a.
• NCBI ID: WP_326498444.1
• Uniprot ID: -
• Organism: Methylobacter sp. YRD-M1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 988286..998705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ558_RS04465 (LZ558_04440)	mutS	988381..990948 (-)	2568	WP_268119636.1	DNA mismatch repair protein MutS	-
LZ558_RS04470 (LZ558_04445)	-	990987..991490 (+)	504	WP_268119637.1	CinA family protein	-
LZ558_RS04475 (LZ558_04450)	-	991529..993037 (-)	1509	WP_268119639.1	hypothetical protein	-
LZ558_RS04480 (LZ558_04455)	pilA/pilA1	993286..993705 (-)	420	WP_326498444.1	pilin	Machinery gene
LZ558_RS04490 (LZ558_04465)	-	994164..994406 (+)	243	WP_268119640.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	-
LZ558_RS04495 (LZ558_04470)	-	994399..994791 (+)	393	WP_268119641.1	type II toxin-antitoxin system VapC family toxin	-
LZ558_RS04500 (LZ558_04475)	-	994953..995150 (+)	198	WP_268119643.1	type II toxin-antitoxin system VapB family antitoxin	-
LZ558_RS04505 (LZ558_04480)	-	995147..995518 (+)	372	WP_268119644.1	type II toxin-antitoxin system VapC family toxin	-
LZ558_RS04510 (LZ558_04485)	-	995655..996176 (-)	522	WP_268119645.1	DUF1264 domain-containing protein	-
LZ558_RS04515 (LZ558_04490)	-	996954..997367 (+)	414	WP_268119646.1	hypothetical protein	-
LZ558_RS04520 (LZ558_04495)	-	997401..998000 (-)	600	WP_268119647.1	hypothetical protein	-
LZ558_RS04525 (LZ558_04500)	-	998121..998312 (+)	192	WP_268119648.1	hypothetical protein	-

Sequence

Protein

• Length: 139 a.a.
• Molecular weight: 14264.41 Da
• Isoelectric Point: 8.4477

>NTDB_id=651089 LZ558_RS04480 WP_326498444.1 993286..993705(-) (pilA/pilA1) [Methylobacter sp. YRD-M1]
MKTQMRKVQQGFTLIELMIVVAIIGILAAIAIPAYNDYTAKAQASEAFTLIDGLKTPLSANLSETGAWAIPAGSVTAGKY
VASIVSGGAAGAYTLLATYVANGANSQIVGKTVTFTYNDATGAWSCASNLPNNIKPASC

Nucleotide

• Length: 420 bp

>NTDB_id=651089 LZ558_RS04480 WP_326498444.1 993286..993705(-) (pilA/pilA1) [Methylobacter sp. YRD-M1]
ATGAAAACTCAAATGAGAAAAGTACAACAAGGTTTTACCTTAATCGAATTAATGATCGTCGTTGCGATCATCGGTATTTT
GGCGGCGATTGCGATTCCGGCTTATAACGACTACACTGCAAAAGCTCAGGCTTCTGAAGCTTTCACTTTAATTGATGGTC
TTAAAACTCCGCTTTCTGCAAATCTCTCAGAGACTGGCGCTTGGGCTATTCCGGCTGGCTCTGTAACTGCTGGTAAATAT
GTTGCTTCGATTGTATCTGGCGGCGCTGCTGGTGCTTATACACTTCTGGCAACCTATGTCGCTAACGGAGCAAATAGTCA
AATTGTCGGCAAAACAGTGACTTTTACTTACAATGATGCAACCGGTGCATGGTCTTGTGCATCTAATCTACCTAATAATA
TTAAACCTGCTTCTTGCTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-31)

• Pilin (bacterial filament) (Pilin) (40-139)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA/pilA1	Eikenella corrodens VA1	44.516	100	0.496
pilA2	Legionella pneumophila str. Paris	44.755	100	0.46
comP	Acinetobacter baylyi ADP1	43.448	100	0.453
pilA2	Legionella pneumophila strain ERS1305867	42.657	100	0.439
pilA/pilAI	Pseudomonas stutzeri DSM 10701	40.411	100	0.424
pilA	Vibrio parahaemolyticus RIMD 2210633	42.963	97.122	0.417
pilA	Acinetobacter nosocomialis M2	54.286	75.54	0.41
pilA	Pseudomonas aeruginosa PAK	37.584	100	0.403
pilA	Acinetobacter baumannii strain A118	40	100	0.403
pilE	Neisseria gonorrhoeae MS11	40.741	97.122	0.396
pilE	Neisseria gonorrhoeae strain FA1090	41.221	94.245	0.388
pilA	Vibrio cholerae C6706	33.54	100	0.388
pilA	Vibrio cholerae strain A1552	33.54	100	0.388
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	33.54	100	0.388
pilA/pilAII	Pseudomonas stutzeri DSM 10701	36.486	100	0.388
pilA	Glaesserella parasuis strain SC1401	37.5	97.842	0.367