Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | IAK_RS0102030 | Genome accession | NZ_AFXK01000001 |
| Coordinates | 435399..436433 (+) | Length | 344 a.a. |
| NCBI ID | WP_003084552.1 | Uniprot ID | A0A0H2ZKV1 |
| Organism | Pseudomonas aeruginosa 213BR | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 430399..441433
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IAK_RS0102005 | - | 430687..432654 (-) | 1968 | WP_003121751.1 | dynamin-like GTPase family protein | - |
| IAK_RS31530 | - | 432762..433058 (-) | 297 | WP_031628111.1 | DUF167 domain-containing protein | - |
| IAK_RS0102015 | - | 433055..433648 (-) | 594 | WP_003084544.1 | YggT family protein | - |
| IAK_RS0102020 | proC | 433659..434480 (-) | 822 | WP_003084546.1 | pyrroline-5-carboxylate reductase | - |
| IAK_RS0102025 | - | 434492..435184 (-) | 693 | WP_003084549.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| IAK_RS0102030 | pilT | 435399..436433 (+) | 1035 | WP_003084552.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| IAK_RS0102035 | pilU | 436611..437759 (+) | 1149 | WP_003100959.1 | type IV pilus ATPase PilU | Machinery gene |
| IAK_RS0102040 | czcD | 437767..438666 (-) | 900 | WP_003100957.1 | CDF family zinc transporter CzcD | - |
| IAK_RS0102045 | - | 438820..439224 (+) | 405 | WP_003084560.1 | NINE protein | - |
| IAK_RS0102050 | - | 439467..440840 (+) | 1374 | WP_003100955.1 | pyridoxal-phosphate dependent enzyme | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38020.89 Da Isoelectric Point: 6.8364
>NTDB_id=64698 IAK_RS0102030 WP_003084552.1 435399..436433(+) (pilT) [Pseudomonas aeruginosa 213BR]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIED
PIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCL
KGLVAKGLISRENAREKAKIPENF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIED
PIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCL
KGLVAKGLISRENAREKAKIPENF
Nucleotide
Download Length: 1035 bp
>NTDB_id=64698 IAK_RS0102030 WP_003084552.1 435399..436433(+) (pilT) [Pseudomonas aeruginosa 213BR]
ATGGATATTACCGAGCTGCTCGCCTTCAGTGCCAAACAGGGCGCTTCGGACCTGCACCTCTCCGCCGGCCTGCCACCCAT
GATCCGGGTGGATGGCGATGTACGCCGGATCAACCTGCCACCGCTGGAACACAAGCAGGTGCATGCGCTGATCTACGACA
TCATGAACGACAAGCAGCGCAAGGACTTCGAGGAATTCCTCGAGACCGACTTCTCCTTCGAGGTGCCGGGCGTCGCGCGT
TTCCGGGTCAACGCCTTCAACCAGAACCGTGGCGCCGGCGCGGTATTCCGGACCATTCCCTCCAAGGTACTGACCATGGA
GGAGCTTGGCATGGGAGAAGTGTTCAAACGTGTTTCAGACGTCCCGCGCGGGTTGGTACTGGTCACCGGGCCGACCGGTT
CGGGCAAGTCCACCACCCTGGCGGCGATGCTCGACTACCTGAACAACACCAAGTACCACCACATCCTCACCATCGAGGAC
CCGATCGAATTCGTCCACGAATCGAAGAAGTGCCTGGTCAACCAGCGCGAGGTGCATCGCGACACCCTCGGCTTCAGCGA
AGCGCTGCGCTCGGCGCTGCGGGAGGACCCGGACATCATCCTGGTCGGCGAGATGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACCGCGGCGGAGACCGGCCACCTGGTATTCGGCACCCTGCACACCACCTCGGCGGCGAAGACCATCGACCGGGTG
GTCGACGTGTTCCCGGCCGAGGAAAAGGCCATGGTTCGCTCGATGCTCTCCGAGTCGCTGCAATCGGTGATCTCGCAGAC
CCTGATCAAGAAGATCGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATCGGCACCCCGGCGATCCGCAACCTGATCC
GCGAGGACAAGGTCGCGCAGATGTATTCGGCGATCCAGACCGGCGGCTCGCTGGGCATGCAGACCCTCGACATGTGCCTC
AAGGGCCTGGTCGCCAAGGGCCTGATCAGCCGCGAGAACGCCCGCGAGAAGGCGAAGATCCCGGAAAACTTCTGA
ATGGATATTACCGAGCTGCTCGCCTTCAGTGCCAAACAGGGCGCTTCGGACCTGCACCTCTCCGCCGGCCTGCCACCCAT
GATCCGGGTGGATGGCGATGTACGCCGGATCAACCTGCCACCGCTGGAACACAAGCAGGTGCATGCGCTGATCTACGACA
TCATGAACGACAAGCAGCGCAAGGACTTCGAGGAATTCCTCGAGACCGACTTCTCCTTCGAGGTGCCGGGCGTCGCGCGT
TTCCGGGTCAACGCCTTCAACCAGAACCGTGGCGCCGGCGCGGTATTCCGGACCATTCCCTCCAAGGTACTGACCATGGA
GGAGCTTGGCATGGGAGAAGTGTTCAAACGTGTTTCAGACGTCCCGCGCGGGTTGGTACTGGTCACCGGGCCGACCGGTT
CGGGCAAGTCCACCACCCTGGCGGCGATGCTCGACTACCTGAACAACACCAAGTACCACCACATCCTCACCATCGAGGAC
CCGATCGAATTCGTCCACGAATCGAAGAAGTGCCTGGTCAACCAGCGCGAGGTGCATCGCGACACCCTCGGCTTCAGCGA
AGCGCTGCGCTCGGCGCTGCGGGAGGACCCGGACATCATCCTGGTCGGCGAGATGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACCGCGGCGGAGACCGGCCACCTGGTATTCGGCACCCTGCACACCACCTCGGCGGCGAAGACCATCGACCGGGTG
GTCGACGTGTTCCCGGCCGAGGAAAAGGCCATGGTTCGCTCGATGCTCTCCGAGTCGCTGCAATCGGTGATCTCGCAGAC
CCTGATCAAGAAGATCGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATCGGCACCCCGGCGATCCGCAACCTGATCC
GCGAGGACAAGGTCGCGCAGATGTATTCGGCGATCCAGACCGGCGGCTCGCTGGGCATGCAGACCCTCGACATGTGCCTC
AAGGGCCTGGTCGCCAAGGGCCTGATCAGCCGCGAGAACGCCCGCGAGAAGGCGAAGATCCCGGAAAACTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
100 |
100 |
1 |
| pilT | Pseudomonas stutzeri DSM 10701 |
94.186 |
100 |
0.942 |
| pilT | Acinetobacter baumannii D1279779 |
84.302 |
100 |
0.843 |
| pilT | Acinetobacter baumannii strain A118 |
84.302 |
100 |
0.843 |
| pilT | Acinetobacter nosocomialis M2 |
84.012 |
100 |
0.84 |
| pilT | Acinetobacter baylyi ADP1 |
81.686 |
100 |
0.817 |
| pilT | Legionella pneumophila strain Lp02 |
74.556 |
98.256 |
0.733 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.556 |
98.256 |
0.733 |
| pilT | Neisseria meningitidis 8013 |
66.667 |
100 |
0.669 |
| pilT | Neisseria gonorrhoeae MS11 |
66.377 |
100 |
0.666 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.765 |
98.837 |
0.66 |
| pilT | Vibrio cholerae strain A1552 |
66.765 |
98.837 |
0.66 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.464 |
100 |
0.526 |
| pilU | Vibrio cholerae strain A1552 |
41.298 |
98.547 |
0.407 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.896 |
97.384 |
0.398 |
| pilU | Acinetobacter baylyi ADP1 |
39.306 |
100 |
0.395 |