Detailed information NTG0646364

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG956_RS23560
• Genome accession: NZ_CP107796
• Coordinates: 5389543..5390829 (+)
• Length: 428 a.a.
• NCBI ID: WP_225100891.1
• Uniprot ID: A0ABY7P715
• Organism: Streptomyces sp. NBC_00557
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5384543..5395829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG956_RS23530 (OG956_23515)	-	5384772..5384966 (+)	195	WP_055703542.1	hypothetical protein	-
OG956_RS23545 (OG956_23530)	tig	5386307..5387686 (+)	1380	WP_330339971.1	trigger factor	-
OG956_RS23550 (OG956_23535)	clpP	5388034..5388639 (+)	606	WP_330342929.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG956_RS23555 (OG956_23540)	clpP	5388707..5389372 (+)	666	WP_330339972.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG956_RS23560 (OG956_23545)	clpX	5389543..5390829 (+)	1287	WP_225100891.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG956_RS23565 (OG956_23550)	-	5390898..5391866 (-)	969	WP_330339973.1	hypothetical protein	-
OG956_RS23570 (OG956_23555)	-	5392004..5394628 (+)	2625	WP_330339974.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46628.48 Da
• Isoelectric Point: 4.7331

>NTDB_id=646364 OG956_RS23560 WP_225100891.1 5389543..5390829(+) (clpX) [Streptomyces sp. NBC_00557]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGASGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEARAGAKGIGFGATILSKRELESKDVFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=646364 OG956_RS23560 WP_225100891.1 5389543..5390829(+) (clpX) [Streptomyces sp. NBC_00557]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAACTCGCCGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAAGCG
GCGAAGAAAGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCGAGCGGCCG
TGACGACGCCATCGAGCTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCGCAGA
CCCTGGCCCGCATGCTGAACGTCCCCTTCGCGATCGCCGACGCGACGGCGCTGACGGAGGCGGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACGGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGACGTCTCCGGCGAAGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAGGGCACCACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAACACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGATCATCGAGGCGCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACCATCCTGTCCAAGCGCGAGCTGGAGTCCAAGGACGTCTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTGCCCGTGATCACCTCGGTCCACAACCTCGACCGC
GAGGCCCTGCTGAAGATCCTGGTGGAGCCCCGCAACGCCCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGGGGCTTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACA
GCCGACGTGGTCCTCTCCAACGTCAACCCGACCCTGATCCCCCGCGACGCGCGGGGCCGCGGCTCGGGGGAGCAGAAGTC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526