Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | L0Y24_RS17800 | Genome accession | NZ_CP090597 |
| Coordinates | 3985062..3986078 (-) | Length | 338 a.a. |
| NCBI ID | WP_256598913.1 | Uniprot ID | - |
| Organism | Pectobacterium aroidearum strain QJ002 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3980062..3991078
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Y24_RS17785 (L0Y24_17765) | nsrR | 3980427..3980852 (-) | 426 | WP_015841587.1 | nitric oxide-sensing transcriptional repressor NsrR | - |
| L0Y24_RS17790 (L0Y24_17770) | - | 3981169..3982740 (+) | 1572 | WP_180778637.1 | methyl-accepting chemotaxis protein | - |
| L0Y24_RS17795 (L0Y24_17775) | - | 3983267..3985093 (+) | 1827 | WP_181845903.1 | diguanylate cyclase | - |
| L0Y24_RS17800 (L0Y24_17780) | pilT | 3985062..3986078 (-) | 1017 | WP_256598913.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| L0Y24_RS17805 (L0Y24_17785) | - | 3986100..3986813 (+) | 714 | WP_194430992.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| L0Y24_RS17810 (L0Y24_17790) | proC | 3986904..3987725 (+) | 822 | WP_015841592.1 | pyrroline-5-carboxylate reductase | - |
| L0Y24_RS17815 (L0Y24_17795) | - | 3987774..3988328 (+) | 555 | WP_010295003.1 | YggT family protein | - |
| L0Y24_RS17820 (L0Y24_17800) | yggU | 3988325..3988615 (+) | 291 | WP_010279110.1 | DUF167 family protein YggU | - |
| L0Y24_RS17825 (L0Y24_17805) | - | 3988633..3989226 (+) | 594 | WP_256598914.1 | XTP/dITP diphosphatase | - |
| L0Y24_RS17830 (L0Y24_17810) | hemW | 3989219..3990358 (+) | 1140 | WP_256598915.1 | radical SAM family heme chaperone HemW | - |
| L0Y24_RS17835 (L0Y24_17815) | - | 3990590..3990850 (+) | 261 | WP_072014188.1 | type II toxin-antitoxin system ParD family antitoxin | - |
Sequence
Protein
Download Length: 338 a.a. Molecular weight: 36910.17 Da Isoelectric Point: 6.9179
>NTDB_id=643867 L0Y24_RS17800 WP_256598913.1 3985062..3986078(-) (pilT) [Pectobacterium aroidearum strain QJ002]
MELDEWIARSVKHNASDLHLCSGHPPVLRVDGRLQPENTLPRLTSEQVAQWCDAWLEPAQREQLRQFGQIDGALMLPDGQ
RLRVNVFRQREGLSAALRIIPSVQPSLDGLHAPPVLSTLLEKPNGLILITGATGSGKSTTLAAMLGALNDSRDRHVITLE
DPIEFIHASRRCLIQQREIGAHSASFAQALRATLREDPDVILLGELRDTETIRLALTAAETGHLVLSTLHTRSASQAVDR
LIDVFPGEEKAYVRSQLATCLQAVVTQRLLPSAHGGRIALYEVLTATAAVGNLIREGKTHQLPGLIQTGTAAGMQTFEQS
YQQRCRDGLISHNCALAV
MELDEWIARSVKHNASDLHLCSGHPPVLRVDGRLQPENTLPRLTSEQVAQWCDAWLEPAQREQLRQFGQIDGALMLPDGQ
RLRVNVFRQREGLSAALRIIPSVQPSLDGLHAPPVLSTLLEKPNGLILITGATGSGKSTTLAAMLGALNDSRDRHVITLE
DPIEFIHASRRCLIQQREIGAHSASFAQALRATLREDPDVILLGELRDTETIRLALTAAETGHLVLSTLHTRSASQAVDR
LIDVFPGEEKAYVRSQLATCLQAVVTQRLLPSAHGGRIALYEVLTATAAVGNLIREGKTHQLPGLIQTGTAAGMQTFEQS
YQQRCRDGLISHNCALAV
Nucleotide
Download Length: 1017 bp
>NTDB_id=643867 L0Y24_RS17800 WP_256598913.1 3985062..3986078(-) (pilT) [Pectobacterium aroidearum strain QJ002]
ATGGAATTGGATGAGTGGATAGCGCGTAGTGTAAAACATAATGCCTCAGATCTGCACCTTTGTAGCGGCCACCCGCCAGT
GTTACGTGTCGATGGGCGGCTACAGCCTGAAAATACCTTACCACGTTTAACGTCAGAGCAGGTGGCACAATGGTGCGATG
CCTGGCTTGAACCCGCTCAGAGAGAACAACTGCGGCAGTTTGGTCAGATAGACGGCGCGTTAATGCTGCCTGATGGGCAG
CGTCTGCGAGTCAATGTGTTTCGCCAGCGAGAAGGGCTGTCTGCGGCGCTGCGTATTATCCCGTCCGTTCAGCCGTCATT
GGACGGGCTACACGCGCCACCCGTTCTGTCGACGCTGCTGGAGAAACCGAACGGGCTGATCCTGATTACCGGAGCGACGG
GGAGCGGTAAATCCACGACGCTGGCGGCAATGCTTGGGGCGTTAAATGACAGTCGCGATCGCCATGTGATTACGCTGGAG
GATCCGATCGAGTTTATCCATGCCAGCCGACGCTGCCTGATTCAACAGCGAGAGATCGGTGCGCACAGCGCGTCTTTTGC
ACAGGCGCTACGGGCCACCTTGCGGGAAGATCCCGATGTGATTTTGCTGGGAGAATTGCGCGATACGGAGACGATTCGGC
TGGCGCTGACGGCGGCGGAAACCGGTCATCTCGTGCTATCCACGCTGCATACGCGCAGTGCATCGCAGGCGGTCGATCGT
CTGATTGACGTCTTTCCCGGTGAAGAGAAAGCCTATGTTCGCAGTCAGCTAGCCACCTGTTTGCAGGCCGTGGTTACGCA
AAGGTTGTTGCCTTCAGCACACGGCGGTCGCATTGCGCTTTATGAAGTGCTGACGGCGACAGCGGCAGTCGGCAACCTGA
TTCGGGAAGGGAAAACGCATCAGCTTCCCGGCCTGATTCAAACGGGAACGGCTGCGGGCATGCAAACGTTCGAGCAAAGC
TACCAGCAGCGCTGTCGGGATGGGCTTATTTCACACAATTGCGCCCTTGCCGTTTAG
ATGGAATTGGATGAGTGGATAGCGCGTAGTGTAAAACATAATGCCTCAGATCTGCACCTTTGTAGCGGCCACCCGCCAGT
GTTACGTGTCGATGGGCGGCTACAGCCTGAAAATACCTTACCACGTTTAACGTCAGAGCAGGTGGCACAATGGTGCGATG
CCTGGCTTGAACCCGCTCAGAGAGAACAACTGCGGCAGTTTGGTCAGATAGACGGCGCGTTAATGCTGCCTGATGGGCAG
CGTCTGCGAGTCAATGTGTTTCGCCAGCGAGAAGGGCTGTCTGCGGCGCTGCGTATTATCCCGTCCGTTCAGCCGTCATT
GGACGGGCTACACGCGCCACCCGTTCTGTCGACGCTGCTGGAGAAACCGAACGGGCTGATCCTGATTACCGGAGCGACGG
GGAGCGGTAAATCCACGACGCTGGCGGCAATGCTTGGGGCGTTAAATGACAGTCGCGATCGCCATGTGATTACGCTGGAG
GATCCGATCGAGTTTATCCATGCCAGCCGACGCTGCCTGATTCAACAGCGAGAGATCGGTGCGCACAGCGCGTCTTTTGC
ACAGGCGCTACGGGCCACCTTGCGGGAAGATCCCGATGTGATTTTGCTGGGAGAATTGCGCGATACGGAGACGATTCGGC
TGGCGCTGACGGCGGCGGAAACCGGTCATCTCGTGCTATCCACGCTGCATACGCGCAGTGCATCGCAGGCGGTCGATCGT
CTGATTGACGTCTTTCCCGGTGAAGAGAAAGCCTATGTTCGCAGTCAGCTAGCCACCTGTTTGCAGGCCGTGGTTACGCA
AAGGTTGTTGCCTTCAGCACACGGCGGTCGCATTGCGCTTTATGAAGTGCTGACGGCGACAGCGGCAGTCGGCAACCTGA
TTCGGGAAGGGAAAACGCATCAGCTTCCCGGCCTGATTCAAACGGGAACGGCTGCGGGCATGCAAACGTTCGAGCAAAGC
TACCAGCAGCGCTGTCGGGATGGGCTTATTTCACACAATTGCGCCCTTGCCGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.