Detailed information
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | L0Y21_RS18255 | Genome accession | NZ_CP090595 |
| Coordinates | 4054019..4055035 (-) | Length | 338 a.a. |
| NCBI ID | WP_256598913.1 | Uniprot ID | - |
| Organism | Pectobacterium aroidearum strain QJ011 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4049019..4060035
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Y21_RS18240 (L0Y21_18220) | nsrR | 4049384..4049809 (-) | 426 | WP_015841587.1 | nitric oxide-sensing transcriptional repressor NsrR | - |
| L0Y21_RS18245 (L0Y21_18225) | - | 4050126..4051697 (+) | 1572 | WP_180778637.1 | methyl-accepting chemotaxis protein | - |
| L0Y21_RS18250 (L0Y21_18230) | - | 4052224..4054050 (+) | 1827 | WP_181845903.1 | diguanylate cyclase | - |
| L0Y21_RS18255 (L0Y21_18235) | pilT | 4054019..4055035 (-) | 1017 | WP_256598913.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| L0Y21_RS18260 (L0Y21_18240) | - | 4055057..4055770 (+) | 714 | WP_194430992.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| L0Y21_RS18265 (L0Y21_18245) | proC | 4055861..4056682 (+) | 822 | WP_015841592.1 | pyrroline-5-carboxylate reductase | - |
| L0Y21_RS18270 (L0Y21_18250) | - | 4056731..4057285 (+) | 555 | WP_010295003.1 | YggT family protein | - |
| L0Y21_RS18275 (L0Y21_18255) | yggU | 4057282..4057572 (+) | 291 | WP_010279110.1 | DUF167 family protein YggU | - |
| L0Y21_RS18280 (L0Y21_18260) | - | 4057590..4058183 (+) | 594 | WP_256598914.1 | XTP/dITP diphosphatase | - |
| L0Y21_RS18285 (L0Y21_18265) | hemW | 4058176..4059315 (+) | 1140 | WP_256598915.1 | radical SAM family heme chaperone HemW | - |
| L0Y21_RS18290 (L0Y21_18270) | - | 4059547..4059807 (+) | 261 | WP_072014188.1 | type II toxin-antitoxin system ParD family antitoxin | - |
Sequence
Protein
Download Length: 338 a.a. Molecular weight: 36910.17 Da Isoelectric Point: 6.9179
>NTDB_id=643821 L0Y21_RS18255 WP_256598913.1 4054019..4055035(-) (pilT) [Pectobacterium aroidearum strain QJ011]
MELDEWIARSVKHNASDLHLCSGHPPVLRVDGRLQPENTLPRLTSEQVAQWCDAWLEPAQREQLRQFGQIDGALMLPDGQ
RLRVNVFRQREGLSAALRIIPSVQPSLDGLHAPPVLSTLLEKPNGLILITGATGSGKSTTLAAMLGALNDSRDRHVITLE
DPIEFIHASRRCLIQQREIGAHSASFAQALRATLREDPDVILLGELRDTETIRLALTAAETGHLVLSTLHTRSASQAVDR
LIDVFPGEEKAYVRSQLATCLQAVVTQRLLPSAHGGRIALYEVLTATAAVGNLIREGKTHQLPGLIQTGTAAGMQTFEQS
YQQRCRDGLISHNCALAV
MELDEWIARSVKHNASDLHLCSGHPPVLRVDGRLQPENTLPRLTSEQVAQWCDAWLEPAQREQLRQFGQIDGALMLPDGQ
RLRVNVFRQREGLSAALRIIPSVQPSLDGLHAPPVLSTLLEKPNGLILITGATGSGKSTTLAAMLGALNDSRDRHVITLE
DPIEFIHASRRCLIQQREIGAHSASFAQALRATLREDPDVILLGELRDTETIRLALTAAETGHLVLSTLHTRSASQAVDR
LIDVFPGEEKAYVRSQLATCLQAVVTQRLLPSAHGGRIALYEVLTATAAVGNLIREGKTHQLPGLIQTGTAAGMQTFEQS
YQQRCRDGLISHNCALAV
Nucleotide
Download Length: 1017 bp
>NTDB_id=643821 L0Y21_RS18255 WP_256598913.1 4054019..4055035(-) (pilT) [Pectobacterium aroidearum strain QJ011]
ATGGAATTGGATGAGTGGATAGCGCGTAGTGTAAAACATAATGCCTCAGATCTGCACCTTTGTAGCGGCCACCCGCCAGT
GTTACGTGTCGATGGGCGGCTACAGCCTGAAAATACCTTACCACGTTTAACGTCAGAGCAGGTGGCACAATGGTGCGATG
CCTGGCTTGAACCCGCTCAGAGAGAACAACTGCGGCAGTTTGGTCAGATAGACGGCGCGTTAATGCTGCCTGATGGGCAG
CGTCTGCGAGTCAATGTGTTTCGCCAGCGAGAAGGGCTGTCTGCGGCGCTGCGTATTATCCCGTCCGTTCAGCCGTCATT
GGACGGGCTACACGCGCCACCCGTTCTGTCGACGCTGCTGGAGAAACCGAACGGGCTGATCCTGATTACCGGAGCGACGG
GGAGCGGTAAATCCACGACGCTGGCGGCAATGCTTGGGGCGTTAAATGACAGTCGCGATCGCCATGTGATTACGCTGGAG
GATCCGATCGAGTTTATCCATGCCAGCCGACGCTGCCTGATTCAACAGCGAGAGATCGGTGCGCACAGCGCGTCTTTTGC
ACAGGCGCTACGGGCCACCTTGCGGGAAGATCCCGATGTGATTTTGCTGGGAGAATTGCGCGATACGGAGACGATTCGGC
TGGCGCTGACGGCGGCGGAAACCGGTCATCTCGTGCTATCCACGCTGCATACGCGCAGTGCATCGCAGGCGGTCGATCGT
CTGATTGACGTCTTTCCCGGTGAAGAGAAAGCCTATGTTCGCAGTCAGCTAGCCACCTGTTTGCAGGCCGTGGTTACGCA
AAGGTTGTTGCCTTCAGCACACGGCGGTCGCATTGCGCTTTATGAAGTGCTGACGGCGACAGCGGCAGTCGGCAACCTGA
TTCGGGAAGGGAAAACGCATCAGCTTCCCGGCCTGATTCAAACGGGAACGGCTGCGGGCATGCAAACGTTCGAGCAAAGC
TACCAGCAGCGCTGTCGGGATGGGCTTATTTCACACAATTGCGCCCTTGCCGTTTAG
ATGGAATTGGATGAGTGGATAGCGCGTAGTGTAAAACATAATGCCTCAGATCTGCACCTTTGTAGCGGCCACCCGCCAGT
GTTACGTGTCGATGGGCGGCTACAGCCTGAAAATACCTTACCACGTTTAACGTCAGAGCAGGTGGCACAATGGTGCGATG
CCTGGCTTGAACCCGCTCAGAGAGAACAACTGCGGCAGTTTGGTCAGATAGACGGCGCGTTAATGCTGCCTGATGGGCAG
CGTCTGCGAGTCAATGTGTTTCGCCAGCGAGAAGGGCTGTCTGCGGCGCTGCGTATTATCCCGTCCGTTCAGCCGTCATT
GGACGGGCTACACGCGCCACCCGTTCTGTCGACGCTGCTGGAGAAACCGAACGGGCTGATCCTGATTACCGGAGCGACGG
GGAGCGGTAAATCCACGACGCTGGCGGCAATGCTTGGGGCGTTAAATGACAGTCGCGATCGCCATGTGATTACGCTGGAG
GATCCGATCGAGTTTATCCATGCCAGCCGACGCTGCCTGATTCAACAGCGAGAGATCGGTGCGCACAGCGCGTCTTTTGC
ACAGGCGCTACGGGCCACCTTGCGGGAAGATCCCGATGTGATTTTGCTGGGAGAATTGCGCGATACGGAGACGATTCGGC
TGGCGCTGACGGCGGCGGAAACCGGTCATCTCGTGCTATCCACGCTGCATACGCGCAGTGCATCGCAGGCGGTCGATCGT
CTGATTGACGTCTTTCCCGGTGAAGAGAAAGCCTATGTTCGCAGTCAGCTAGCCACCTGTTTGCAGGCCGTGGTTACGCA
AAGGTTGTTGCCTTCAGCACACGGCGGTCGCATTGCGCTTTATGAAGTGCTGACGGCGACAGCGGCAGTCGGCAACCTGA
TTCGGGAAGGGAAAACGCATCAGCTTCCCGGCCTGATTCAAACGGGAACGGCTGCGGGCATGCAAACGTTCGAGCAAAGC
TACCAGCAGCGCTGTCGGGATGGGCTTATTTCACACAATTGCGCCCTTGCCGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.