Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | L0Y27_RS17365 | Genome accession | NZ_CP090592 |
| Coordinates | 3916962..3917978 (-) | Length | 338 a.a. |
| NCBI ID | WP_256598913.1 | Uniprot ID | - |
| Organism | Pectobacterium aroidearum strain QJ311 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3911962..3922978
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Y27_RS17350 (L0Y27_17330) | nsrR | 3912327..3912752 (-) | 426 | WP_015841587.1 | nitric oxide-sensing transcriptional repressor NsrR | - |
| L0Y27_RS17355 (L0Y27_17335) | - | 3913069..3914640 (+) | 1572 | WP_180778637.1 | methyl-accepting chemotaxis protein | - |
| L0Y27_RS17360 (L0Y27_17340) | - | 3915167..3916993 (+) | 1827 | WP_181845903.1 | diguanylate cyclase | - |
| L0Y27_RS17365 (L0Y27_17345) | pilT | 3916962..3917978 (-) | 1017 | WP_256598913.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| L0Y27_RS17370 (L0Y27_17350) | - | 3918000..3918713 (+) | 714 | WP_194430992.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| L0Y27_RS17375 (L0Y27_17355) | proC | 3918804..3919625 (+) | 822 | WP_015841592.1 | pyrroline-5-carboxylate reductase | - |
| L0Y27_RS17380 (L0Y27_17360) | - | 3919674..3920228 (+) | 555 | WP_010295003.1 | YggT family protein | - |
| L0Y27_RS17385 (L0Y27_17365) | yggU | 3920225..3920515 (+) | 291 | WP_010279110.1 | DUF167 family protein YggU | - |
| L0Y27_RS17390 (L0Y27_17370) | - | 3920533..3921126 (+) | 594 | WP_256598914.1 | XTP/dITP diphosphatase | - |
| L0Y27_RS17395 (L0Y27_17375) | hemW | 3921119..3922258 (+) | 1140 | WP_256598915.1 | radical SAM family heme chaperone HemW | - |
| L0Y27_RS17400 (L0Y27_17380) | - | 3922490..3922750 (+) | 261 | WP_072014188.1 | type II toxin-antitoxin system ParD family antitoxin | - |
Sequence
Protein
Download Length: 338 a.a. Molecular weight: 36910.17 Da Isoelectric Point: 6.9179
>NTDB_id=643750 L0Y27_RS17365 WP_256598913.1 3916962..3917978(-) (pilT) [Pectobacterium aroidearum strain QJ311]
MELDEWIARSVKHNASDLHLCSGHPPVLRVDGRLQPENTLPRLTSEQVAQWCDAWLEPAQREQLRQFGQIDGALMLPDGQ
RLRVNVFRQREGLSAALRIIPSVQPSLDGLHAPPVLSTLLEKPNGLILITGATGSGKSTTLAAMLGALNDSRDRHVITLE
DPIEFIHASRRCLIQQREIGAHSASFAQALRATLREDPDVILLGELRDTETIRLALTAAETGHLVLSTLHTRSASQAVDR
LIDVFPGEEKAYVRSQLATCLQAVVTQRLLPSAHGGRIALYEVLTATAAVGNLIREGKTHQLPGLIQTGTAAGMQTFEQS
YQQRCRDGLISHNCALAV
MELDEWIARSVKHNASDLHLCSGHPPVLRVDGRLQPENTLPRLTSEQVAQWCDAWLEPAQREQLRQFGQIDGALMLPDGQ
RLRVNVFRQREGLSAALRIIPSVQPSLDGLHAPPVLSTLLEKPNGLILITGATGSGKSTTLAAMLGALNDSRDRHVITLE
DPIEFIHASRRCLIQQREIGAHSASFAQALRATLREDPDVILLGELRDTETIRLALTAAETGHLVLSTLHTRSASQAVDR
LIDVFPGEEKAYVRSQLATCLQAVVTQRLLPSAHGGRIALYEVLTATAAVGNLIREGKTHQLPGLIQTGTAAGMQTFEQS
YQQRCRDGLISHNCALAV
Nucleotide
Download Length: 1017 bp
>NTDB_id=643750 L0Y27_RS17365 WP_256598913.1 3916962..3917978(-) (pilT) [Pectobacterium aroidearum strain QJ311]
ATGGAATTGGATGAGTGGATAGCGCGTAGTGTAAAACATAATGCCTCAGATCTGCACCTTTGTAGCGGCCACCCGCCAGT
GTTACGTGTCGATGGGCGGCTACAGCCTGAAAATACCTTACCACGTTTAACGTCAGAGCAGGTGGCACAATGGTGCGATG
CCTGGCTTGAACCCGCTCAGAGAGAACAACTGCGGCAGTTTGGTCAGATAGACGGCGCGTTAATGCTGCCTGATGGGCAG
CGTCTGCGAGTCAATGTGTTTCGCCAGCGAGAAGGGCTGTCTGCGGCGCTGCGTATTATCCCGTCCGTTCAGCCGTCATT
GGACGGGCTACACGCGCCACCCGTTCTGTCGACGCTGCTGGAGAAACCGAACGGGCTGATCCTGATTACCGGAGCGACGG
GGAGCGGTAAATCCACGACGCTGGCGGCAATGCTTGGGGCGTTAAATGACAGTCGCGATCGCCATGTGATTACGCTGGAG
GATCCGATCGAGTTTATCCATGCCAGCCGACGCTGCCTGATTCAACAGCGAGAGATCGGTGCGCACAGCGCGTCTTTTGC
ACAGGCGCTACGGGCCACCTTGCGGGAAGATCCCGATGTGATTTTGCTGGGAGAATTGCGCGATACGGAGACGATTCGGC
TGGCGCTGACGGCGGCGGAAACCGGTCATCTCGTGCTATCCACGCTGCATACGCGCAGTGCATCGCAGGCGGTCGATCGT
CTGATTGACGTCTTTCCCGGTGAAGAGAAAGCCTATGTTCGCAGTCAGCTAGCCACCTGTTTGCAGGCCGTGGTTACGCA
AAGGTTGTTGCCTTCAGCACACGGCGGTCGCATTGCGCTTTATGAAGTGCTGACGGCGACAGCGGCAGTCGGCAACCTGA
TTCGGGAAGGGAAAACGCATCAGCTTCCCGGCCTGATTCAAACGGGAACGGCTGCGGGCATGCAAACGTTCGAGCAAAGC
TACCAGCAGCGCTGTCGGGATGGGCTTATTTCACACAATTGCGCCCTTGCCGTTTAG
ATGGAATTGGATGAGTGGATAGCGCGTAGTGTAAAACATAATGCCTCAGATCTGCACCTTTGTAGCGGCCACCCGCCAGT
GTTACGTGTCGATGGGCGGCTACAGCCTGAAAATACCTTACCACGTTTAACGTCAGAGCAGGTGGCACAATGGTGCGATG
CCTGGCTTGAACCCGCTCAGAGAGAACAACTGCGGCAGTTTGGTCAGATAGACGGCGCGTTAATGCTGCCTGATGGGCAG
CGTCTGCGAGTCAATGTGTTTCGCCAGCGAGAAGGGCTGTCTGCGGCGCTGCGTATTATCCCGTCCGTTCAGCCGTCATT
GGACGGGCTACACGCGCCACCCGTTCTGTCGACGCTGCTGGAGAAACCGAACGGGCTGATCCTGATTACCGGAGCGACGG
GGAGCGGTAAATCCACGACGCTGGCGGCAATGCTTGGGGCGTTAAATGACAGTCGCGATCGCCATGTGATTACGCTGGAG
GATCCGATCGAGTTTATCCATGCCAGCCGACGCTGCCTGATTCAACAGCGAGAGATCGGTGCGCACAGCGCGTCTTTTGC
ACAGGCGCTACGGGCCACCTTGCGGGAAGATCCCGATGTGATTTTGCTGGGAGAATTGCGCGATACGGAGACGATTCGGC
TGGCGCTGACGGCGGCGGAAACCGGTCATCTCGTGCTATCCACGCTGCATACGCGCAGTGCATCGCAGGCGGTCGATCGT
CTGATTGACGTCTTTCCCGGTGAAGAGAAAGCCTATGTTCGCAGTCAGCTAGCCACCTGTTTGCAGGCCGTGGTTACGCA
AAGGTTGTTGCCTTCAGCACACGGCGGTCGCATTGCGCTTTATGAAGTGCTGACGGCGACAGCGGCAGTCGGCAACCTGA
TTCGGGAAGGGAAAACGCATCAGCTTCCCGGCCTGATTCAAACGGGAACGGCTGCGGGCATGCAAACGTTCGAGCAAAGC
TACCAGCAGCGCTGTCGGGATGGGCTTATTTCACACAATTGCGCCCTTGCCGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.