Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | LNN31_RS01015 | Genome accession | NZ_CP087994 |
| Coordinates | 214358..215410 (+) | Length | 350 a.a. |
| NCBI ID | WP_228877852.1 | Uniprot ID | - |
| Organism | Acetobacterium wieringae strain Y | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 209358..220410
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN31_RS01005 (LNN31_01005) | - | 210408..212630 (+) | 2223 | WP_228877856.1 | EAL domain-containing protein | - |
| LNN31_RS01010 (LNN31_01010) | - | 212661..214343 (+) | 1683 | WP_228877854.1 | GspE/PulE family protein | - |
| LNN31_RS01015 (LNN31_01015) | pilT | 214358..215410 (+) | 1053 | WP_228877852.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| LNN31_RS01020 (LNN31_01020) | - | 216114..216743 (+) | 630 | WP_228877850.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| LNN31_RS01025 (LNN31_01025) | - | 216844..217434 (+) | 591 | WP_263992889.1 | type II secretion system protein | - |
| LNN31_RS01030 (LNN31_01030) | - | 217502..218209 (+) | 708 | WP_228877847.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| LNN31_RS01035 (LNN31_01035) | - | 218698..219267 (+) | 570 | WP_228877845.1 | type II secretion system protein | - |
| LNN31_RS01040 (LNN31_01040) | - | 219541..219942 (+) | 402 | WP_228877843.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 38988.44 Da Isoelectric Point: 6.6384
>NTDB_id=632157 LNN31_RS01015 WP_228877852.1 214358..215410(+) (pilT) [Acetobacterium wieringae strain Y]
MRFLDLVNYGRRNDCSDIHLSRDLPPVFRKNGKLYQSDFEHNPQIIEQLIFSILTPAERKKLEDGSDLDFCHVTPEGLRQ
RVNIYKQQGSYAAAIRLLNDTIPSFEELKLPPIIRKLASEPRGLILITGPTGSGKSTTLASMIDYINTNRAVHILTIEDP
VEYKHTHKHSIVHQREIGVDASSFAAALRSSLREDPDVILVGEMRDYETVSAAVTAAETGHLVLSTLHTIGAANTIDRII
DVFPPHSQQQIRTQLSSILKGVVTQQLVPLADGSGRMAALEVLIGTDAVLNLIRENKTHQLASVMQTGGRDGMKTLNADL
AMLVRDQKISYEVGLEWASDKQEFNQYFGR
MRFLDLVNYGRRNDCSDIHLSRDLPPVFRKNGKLYQSDFEHNPQIIEQLIFSILTPAERKKLEDGSDLDFCHVTPEGLRQ
RVNIYKQQGSYAAAIRLLNDTIPSFEELKLPPIIRKLASEPRGLILITGPTGSGKSTTLASMIDYINTNRAVHILTIEDP
VEYKHTHKHSIVHQREIGVDASSFAAALRSSLREDPDVILVGEMRDYETVSAAVTAAETGHLVLSTLHTIGAANTIDRII
DVFPPHSQQQIRTQLSSILKGVVTQQLVPLADGSGRMAALEVLIGTDAVLNLIRENKTHQLASVMQTGGRDGMKTLNADL
AMLVRDQKISYEVGLEWASDKQEFNQYFGR
Nucleotide
Download Length: 1053 bp
>NTDB_id=632157 LNN31_RS01015 WP_228877852.1 214358..215410(+) (pilT) [Acetobacterium wieringae strain Y]
ATGCGTTTTTTAGATCTGGTCAACTATGGCCGTCGCAACGACTGTTCAGACATTCATTTGTCCCGGGATCTACCCCCGGT
TTTTAGAAAAAACGGCAAGCTCTATCAGAGTGATTTTGAGCACAACCCGCAGATTATTGAACAACTGATTTTCAGCATCC
TGACCCCGGCGGAGCGAAAAAAGCTGGAAGATGGAAGTGACCTGGATTTTTGCCATGTTACCCCGGAAGGGCTGCGGCAG
CGGGTCAATATCTATAAACAGCAGGGCAGCTATGCCGCCGCTATCCGCCTCCTTAACGATACCATCCCCAGCTTTGAGGA
ACTCAAGCTGCCACCGATTATCCGCAAGCTGGCATCGGAGCCCCGGGGGCTGATTCTGATTACCGGGCCCACTGGCAGCG
GGAAATCGACCACCCTGGCCTCGATGATTGACTATATCAATACCAACCGGGCGGTCCATATCTTAACCATTGAAGACCCG
GTGGAGTATAAGCATACCCATAAGCACAGCATTGTTCATCAGCGGGAAATCGGGGTCGATGCCAGCTCCTTTGCCGCCGC
TTTGCGCTCGTCCCTGCGGGAAGACCCGGATGTTATTCTGGTGGGCGAAATGCGGGACTACGAAACGGTGTCGGCCGCCG
TCACTGCCGCTGAAACCGGCCATCTGGTGCTGTCGACCCTGCATACCATTGGCGCTGCCAATACCATCGACCGGATCATT
GACGTCTTTCCCCCCCACAGCCAGCAGCAGATCCGCACCCAGCTGTCCAGCATTTTAAAAGGGGTCGTCACCCAGCAGCT
GGTGCCCCTGGCCGATGGCTCTGGTCGGATGGCCGCTCTGGAGGTGCTGATTGGGACTGATGCAGTGCTTAATTTGATCC
GTGAAAATAAAACCCACCAGCTGGCCTCGGTGATGCAAACCGGTGGCCGGGACGGCATGAAAACCCTCAATGCCGATCTG
GCGATGCTGGTTCGGGACCAGAAAATCAGCTACGAGGTCGGTCTTGAGTGGGCCAGCGATAAGCAGGAGTTTAATCAGTA
TTTTGGGCGATAG
ATGCGTTTTTTAGATCTGGTCAACTATGGCCGTCGCAACGACTGTTCAGACATTCATTTGTCCCGGGATCTACCCCCGGT
TTTTAGAAAAAACGGCAAGCTCTATCAGAGTGATTTTGAGCACAACCCGCAGATTATTGAACAACTGATTTTCAGCATCC
TGACCCCGGCGGAGCGAAAAAAGCTGGAAGATGGAAGTGACCTGGATTTTTGCCATGTTACCCCGGAAGGGCTGCGGCAG
CGGGTCAATATCTATAAACAGCAGGGCAGCTATGCCGCCGCTATCCGCCTCCTTAACGATACCATCCCCAGCTTTGAGGA
ACTCAAGCTGCCACCGATTATCCGCAAGCTGGCATCGGAGCCCCGGGGGCTGATTCTGATTACCGGGCCCACTGGCAGCG
GGAAATCGACCACCCTGGCCTCGATGATTGACTATATCAATACCAACCGGGCGGTCCATATCTTAACCATTGAAGACCCG
GTGGAGTATAAGCATACCCATAAGCACAGCATTGTTCATCAGCGGGAAATCGGGGTCGATGCCAGCTCCTTTGCCGCCGC
TTTGCGCTCGTCCCTGCGGGAAGACCCGGATGTTATTCTGGTGGGCGAAATGCGGGACTACGAAACGGTGTCGGCCGCCG
TCACTGCCGCTGAAACCGGCCATCTGGTGCTGTCGACCCTGCATACCATTGGCGCTGCCAATACCATCGACCGGATCATT
GACGTCTTTCCCCCCCACAGCCAGCAGCAGATCCGCACCCAGCTGTCCAGCATTTTAAAAGGGGTCGTCACCCAGCAGCT
GGTGCCCCTGGCCGATGGCTCTGGTCGGATGGCCGCTCTGGAGGTGCTGATTGGGACTGATGCAGTGCTTAATTTGATCC
GTGAAAATAAAACCCACCAGCTGGCCTCGGTGATGCAAACCGGTGGCCGGGACGGCATGAAAACCCTCAATGCCGATCTG
GCGATGCTGGTTCGGGACCAGAAAATCAGCTACGAGGTCGGTCTTGAGTGGGCCAGCGATAAGCAGGAGTTTAATCAGTA
TTTTGGGCGATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.026 |
97.429 |
0.497 |
| pilT | Legionella pneumophila strain ERS1305867 |
47.55 |
99.143 |
0.471 |
| pilT | Legionella pneumophila strain Lp02 |
47.55 |
99.143 |
0.471 |
| pilT | Neisseria meningitidis 8013 |
47.399 |
98.857 |
0.469 |
| pilT | Neisseria gonorrhoeae MS11 |
46.821 |
98.857 |
0.463 |
| pilT | Pseudomonas aeruginosa PAK |
45.533 |
99.143 |
0.451 |
| pilT | Acinetobacter baylyi ADP1 |
44.957 |
99.143 |
0.446 |
| pilT | Pseudomonas stutzeri DSM 10701 |
44.928 |
98.571 |
0.443 |
| pilT | Acinetobacter baumannii D1279779 |
44.669 |
99.143 |
0.443 |
| pilT | Acinetobacter nosocomialis M2 |
44.669 |
99.143 |
0.443 |
| pilT | Acinetobacter baumannii strain A118 |
44.669 |
99.143 |
0.443 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
46.177 |
93.429 |
0.431 |
| pilT | Vibrio cholerae strain A1552 |
46.177 |
93.429 |
0.431 |
| pilU | Acinetobacter baylyi ADP1 |
40.588 |
97.143 |
0.394 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.306 |
98.857 |
0.389 |
| pilU | Vibrio cholerae strain A1552 |
39.815 |
92.571 |
0.369 |