Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CAETHG_RS16735 | Genome accession | NC_022592 |
| Coordinates | 3562940..3563995 (+) | Length | 351 a.a. |
| NCBI ID | WP_013237892.1 | Uniprot ID | A0A162KYQ6 |
| Organism | Clostridium autoethanogenum DSM 10061 | ||
| Function | mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3557940..3568995
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAETHG_RS16715 (CAETHG_3305) | - | 3558258..3558905 (+) | 648 | WP_013237888.1 | O-methyltransferase | - |
| CAETHG_RS16720 (CAETHG_3306) | - | 3558907..3560133 (+) | 1227 | WP_013237889.1 | U32 family peptidase | - |
| CAETHG_RS16725 (CAETHG_3307) | - | 3560219..3561883 (+) | 1665 | WP_013237890.1 | penicillin-binding transpeptidase domain-containing protein | - |
| CAETHG_RS16730 (CAETHG_3308) | sigK | 3561966..3562666 (+) | 701 | Protein_3273 | RNA polymerase sporulation sigma factor SigK | - |
| CAETHG_RS16735 (CAETHG_3309) | pilT | 3562940..3563995 (+) | 1056 | WP_013237892.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CAETHG_RS16740 (CAETHG_3310) | - | 3564131..3565405 (+) | 1275 | WP_013237893.1 | glycosyltransferase family 2 protein | - |
| CAETHG_RS16745 (CAETHG_3311) | ftsA | 3565792..3567063 (+) | 1272 | WP_029170054.1 | cell division protein FtsA | - |
| CAETHG_RS16750 (CAETHG_3312) | ftsZ | 3567082..3568191 (+) | 1110 | WP_013237895.1 | cell division protein FtsZ | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 38821.29 Da Isoelectric Point: 8.5799
>NTDB_id=63006 CAETHG_RS16735 WP_013237892.1 3562940..3563995(+) (pilT) [Clostridium autoethanogenum DSM 10061]
MLSLKDLLEITIKEEASDLHLTVGIPPVIRVNGELEVLGKEKLQPSDTERFSKEILDKDYDKYMKIGEIDISFSVAGLGR
FRVNIFKQRGSNAIAVRVVGLKIPTLNELKFPQVIKNLLSYKKGLILVTGPTGCGKSTTLAAMINEINCTRAAHIITLED
PIEYLHKHNKSIINQREIGKDSLSYANALKSVLREDPDVILVGEMRDLETISVVLTASETGHLVFSTLHTIGAAKTIDRI
VDVFPPYQQQQIKIQLAAVLRGIVSQQLIHREDGKGRVAAVETMIATPAIKNMIREGKTYQIESSMQTGSKYGMKTMDIA
LAELYKKGLISYESAIAYACDANIITKIISL
MLSLKDLLEITIKEEASDLHLTVGIPPVIRVNGELEVLGKEKLQPSDTERFSKEILDKDYDKYMKIGEIDISFSVAGLGR
FRVNIFKQRGSNAIAVRVVGLKIPTLNELKFPQVIKNLLSYKKGLILVTGPTGCGKSTTLAAMINEINCTRAAHIITLED
PIEYLHKHNKSIINQREIGKDSLSYANALKSVLREDPDVILVGEMRDLETISVVLTASETGHLVFSTLHTIGAAKTIDRI
VDVFPPYQQQQIKIQLAAVLRGIVSQQLIHREDGKGRVAAVETMIATPAIKNMIREGKTYQIESSMQTGSKYGMKTMDIA
LAELYKKGLISYESAIAYACDANIITKIISL
Nucleotide
Download Length: 1056 bp
>NTDB_id=63006 CAETHG_RS16735 WP_013237892.1 3562940..3563995(+) (pilT) [Clostridium autoethanogenum DSM 10061]
TTGCTATCATTAAAAGATTTATTAGAAATAACTATTAAAGAAGAGGCATCAGATTTGCACCTTACTGTAGGTATACCTCC
TGTAATAAGGGTAAATGGAGAACTTGAAGTACTTGGAAAAGAAAAACTGCAGCCATCAGATACAGAAAGATTTAGTAAAG
AAATATTAGATAAAGATTATGATAAATATATGAAAATTGGAGAAATCGACATATCATTTTCTGTAGCTGGACTTGGCAGA
TTTAGAGTAAATATTTTCAAGCAAAGGGGAAGTAATGCCATTGCAGTGAGAGTTGTAGGATTGAAAATACCAACTTTAAA
TGAACTTAAATTTCCACAGGTAATAAAAAATCTTTTATCTTATAAAAAAGGACTGATTTTGGTAACAGGTCCTACAGGTT
GTGGAAAAAGTACGACTTTAGCAGCTATGATAAATGAAATAAATTGTACAAGAGCTGCACATATAATAACTTTAGAAGAT
CCTATAGAATATTTACATAAGCACAACAAGTCTATAATAAATCAGAGGGAAATAGGGAAAGATTCCTTAAGCTATGCTAA
TGCTTTAAAGTCAGTACTTAGAGAAGATCCAGATGTAATTTTAGTGGGAGAAATGAGAGACCTTGAAACTATATCTGTTG
TGCTTACGGCTTCTGAAACCGGACATCTTGTATTTTCGACGTTACATACTATAGGAGCAGCTAAAACTATAGATAGAATT
GTAGATGTATTTCCACCGTATCAACAACAGCAGATAAAAATACAATTAGCAGCAGTTTTAAGGGGAATAGTATCTCAGCA
GCTTATACATAGAGAAGATGGTAAGGGAAGAGTAGCAGCAGTTGAGACTATGATTGCTACTCCAGCCATTAAAAATATGA
TAAGAGAAGGAAAAACCTATCAAATAGAATCTTCAATGCAAACCGGGTCAAAGTATGGTATGAAGACAATGGATATAGCA
CTGGCGGAACTTTATAAAAAAGGATTAATATCTTATGAGTCTGCTATTGCCTATGCTTGTGATGCAAATATAATAACTAA
AATAATTTCATTATAG
TTGCTATCATTAAAAGATTTATTAGAAATAACTATTAAAGAAGAGGCATCAGATTTGCACCTTACTGTAGGTATACCTCC
TGTAATAAGGGTAAATGGAGAACTTGAAGTACTTGGAAAAGAAAAACTGCAGCCATCAGATACAGAAAGATTTAGTAAAG
AAATATTAGATAAAGATTATGATAAATATATGAAAATTGGAGAAATCGACATATCATTTTCTGTAGCTGGACTTGGCAGA
TTTAGAGTAAATATTTTCAAGCAAAGGGGAAGTAATGCCATTGCAGTGAGAGTTGTAGGATTGAAAATACCAACTTTAAA
TGAACTTAAATTTCCACAGGTAATAAAAAATCTTTTATCTTATAAAAAAGGACTGATTTTGGTAACAGGTCCTACAGGTT
GTGGAAAAAGTACGACTTTAGCAGCTATGATAAATGAAATAAATTGTACAAGAGCTGCACATATAATAACTTTAGAAGAT
CCTATAGAATATTTACATAAGCACAACAAGTCTATAATAAATCAGAGGGAAATAGGGAAAGATTCCTTAAGCTATGCTAA
TGCTTTAAAGTCAGTACTTAGAGAAGATCCAGATGTAATTTTAGTGGGAGAAATGAGAGACCTTGAAACTATATCTGTTG
TGCTTACGGCTTCTGAAACCGGACATCTTGTATTTTCGACGTTACATACTATAGGAGCAGCTAAAACTATAGATAGAATT
GTAGATGTATTTCCACCGTATCAACAACAGCAGATAAAAATACAATTAGCAGCAGTTTTAAGGGGAATAGTATCTCAGCA
GCTTATACATAGAGAAGATGGTAAGGGAAGAGTAGCAGCAGTTGAGACTATGATTGCTACTCCAGCCATTAAAAATATGA
TAAGAGAAGGAAAAACCTATCAAATAGAATCTTCAATGCAAACCGGGTCAAAGTATGGTATGAAGACAATGGATATAGCA
CTGGCGGAACTTTATAAAAAAGGATTAATATCTTATGAGTCTGCTATTGCCTATGCTTGTGATGCAAATATAATAACTAA
AATAATTTCATTATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baylyi ADP1 |
50.294 |
96.866 |
0.487 |
| pilT | Vibrio cholerae strain A1552 |
50.599 |
95.157 |
0.481 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.599 |
95.157 |
0.481 |
| pilT | Pseudomonas aeruginosa PAK |
49.558 |
96.581 |
0.479 |
| pilT | Neisseria meningitidis 8013 |
50 |
95.726 |
0.479 |
| pilT | Neisseria gonorrhoeae MS11 |
49.552 |
95.442 |
0.473 |
| pilT | Pseudomonas stutzeri DSM 10701 |
48.673 |
96.581 |
0.47 |
| pilT | Acinetobacter baumannii strain A118 |
49.107 |
95.726 |
0.47 |
| pilT | Acinetobacter nosocomialis M2 |
49.107 |
95.726 |
0.47 |
| pilT | Acinetobacter baumannii D1279779 |
49.107 |
95.726 |
0.47 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
46.839 |
99.145 |
0.464 |
| pilT | Legionella pneumophila strain Lp02 |
46.667 |
98.291 |
0.459 |
| pilT | Legionella pneumophila strain ERS1305867 |
46.667 |
98.291 |
0.459 |
| pilU | Acinetobacter baylyi ADP1 |
40.407 |
98.006 |
0.396 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.601 |
100 |
0.396 |
| pilU | Vibrio cholerae strain A1552 |
39.942 |
97.721 |
0.39 |