Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | K8O97_RS13570 | Genome accession | NZ_CP082848 |
| Coordinates | 3047297..3048418 (-) | Length | 373 a.a. |
| NCBI ID | WP_027225181.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain FDAARGOS_1482 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3042297..3053418
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8O97_RS13555 (K8O97_13500) | - | 3043178..3043615 (-) | 438 | WP_014844477.1 | hypothetical protein | - |
| K8O97_RS13560 (K8O97_13505) | - | 3043896..3045191 (+) | 1296 | WP_027225179.1 | serine/threonine transporter | - |
| K8O97_RS13565 (K8O97_13510) | ankK | 3045285..3047210 (-) | 1926 | WP_027225180.1 | Dot/Icm T4SS effector AnkK/LegA5 | - |
| K8O97_RS13570 (K8O97_13515) | pilU | 3047297..3048418 (-) | 1122 | WP_027225181.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| K8O97_RS13575 (K8O97_13520) | - | 3048508..3050436 (-) | 1929 | WP_027225182.1 | L-gulono-gamma-lactone oxidase | - |
| K8O97_RS13580 (K8O97_13525) | - | 3050724..3051560 (-) | 837 | WP_027225183.1 | phytanoyl-CoA dioxygenase family protein | - |
| K8O97_RS13585 (K8O97_13530) | radA | 3051557..3052912 (-) | 1356 | WP_027219255.1 | DNA repair protein RadA | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41762.10 Da Isoelectric Point: 5.4724
>NTDB_id=602993 K8O97_RS13570 WP_027225181.1 3047297..3048418(-) (pilU) [Legionella pneumophila strain FDAARGOS_1482]
MDITPFFKLMVDKGASDLFFSVGAPPNIKIEGITSPIGLVPIKSNQMAEIVLSIMNDAQQKEFESKMELNMAFSLAGVGR
FRINLFRQRGEVAMVVRYIKGEIPSIEDLNLPQILKSLVLELRGLVLVVGSTGSGKSTTLAAMINHRNENHRGHILTIED
PIEYIHQHKKSIVDQREIGIDTLSYDNALKNAMREAPDVILIGEIRDLNSMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPDEARQQILLDLSLNLKAIISLRLIPGVDNQRVAAVEILINSPYISDLIEKGKIDDIKEVMARSTEQGMQTFDQAL
FNLYKEGKITKENAIKYADSKNNVGLQIRLGEEKNFNIQDENLQIQPDDIDKF
MDITPFFKLMVDKGASDLFFSVGAPPNIKIEGITSPIGLVPIKSNQMAEIVLSIMNDAQQKEFESKMELNMAFSLAGVGR
FRINLFRQRGEVAMVVRYIKGEIPSIEDLNLPQILKSLVLELRGLVLVVGSTGSGKSTTLAAMINHRNENHRGHILTIED
PIEYIHQHKKSIVDQREIGIDTLSYDNALKNAMREAPDVILIGEIRDLNSMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPDEARQQILLDLSLNLKAIISLRLIPGVDNQRVAAVEILINSPYISDLIEKGKIDDIKEVMARSTEQGMQTFDQAL
FNLYKEGKITKENAIKYADSKNNVGLQIRLGEEKNFNIQDENLQIQPDDIDKF
Nucleotide
Download Length: 1122 bp
>NTDB_id=602993 K8O97_RS13570 WP_027225181.1 3047297..3048418(-) (pilU) [Legionella pneumophila strain FDAARGOS_1482]
ATGGATATTACTCCTTTTTTTAAGCTCATGGTCGATAAAGGTGCCTCAGATTTGTTTTTCAGTGTCGGGGCACCGCCAAA
TATTAAAATCGAGGGCATCACATCACCTATTGGCCTGGTTCCTATCAAATCGAATCAAATGGCAGAAATTGTTTTATCTA
TTATGAATGACGCACAGCAAAAAGAATTTGAGTCTAAAATGGAACTCAATATGGCTTTTTCATTAGCTGGAGTAGGGCGT
TTCCGAATCAATTTATTCAGGCAACGTGGCGAAGTGGCTATGGTGGTGCGTTACATCAAGGGCGAAATACCTTCTATAGA
AGATTTAAATCTCCCTCAAATTTTAAAGTCTCTGGTCTTGGAGTTACGAGGTTTAGTATTGGTTGTTGGGTCCACGGGAT
CGGGTAAATCAACGACTCTGGCCGCGATGATCAACCACCGTAATGAAAATCACAGAGGGCATATTTTAACAATAGAGGAT
CCTATTGAATATATACATCAACATAAAAAATCAATAGTTGATCAACGAGAGATAGGCATTGATACTCTAAGCTATGACAA
TGCATTGAAAAACGCAATGAGAGAAGCACCTGATGTGATATTAATTGGTGAAATTCGTGATCTTAACTCAATGAAACATG
CGATAGCTTATGCTGAAACAGGACATTTGTGCATTTCTACTTTGCATGCCAATAACGCCAATCAGGCTCTGGATAGAGTG
ATTAATTTTTTCCCCGATGAGGCAAGACAACAGATATTATTAGATTTATCTCTTAATTTAAAAGCAATCATTTCATTACG
TTTGATACCAGGAGTTGATAATCAACGTGTCGCAGCGGTGGAGATCTTGATTAACTCTCCTTACATTTCCGATTTGATTG
AAAAAGGGAAGATAGACGATATTAAAGAAGTCATGGCAAGAAGCACGGAACAAGGCATGCAGACTTTCGATCAGGCTTTA
TTTAATTTATATAAAGAAGGAAAAATTACCAAAGAAAATGCGATTAAGTATGCTGATTCAAAAAACAATGTGGGTTTACA
AATTCGATTGGGCGAAGAAAAAAATTTTAATATTCAAGATGAGAATTTACAAATACAACCCGATGATATTGATAAGTTTT
AA
ATGGATATTACTCCTTTTTTTAAGCTCATGGTCGATAAAGGTGCCTCAGATTTGTTTTTCAGTGTCGGGGCACCGCCAAA
TATTAAAATCGAGGGCATCACATCACCTATTGGCCTGGTTCCTATCAAATCGAATCAAATGGCAGAAATTGTTTTATCTA
TTATGAATGACGCACAGCAAAAAGAATTTGAGTCTAAAATGGAACTCAATATGGCTTTTTCATTAGCTGGAGTAGGGCGT
TTCCGAATCAATTTATTCAGGCAACGTGGCGAAGTGGCTATGGTGGTGCGTTACATCAAGGGCGAAATACCTTCTATAGA
AGATTTAAATCTCCCTCAAATTTTAAAGTCTCTGGTCTTGGAGTTACGAGGTTTAGTATTGGTTGTTGGGTCCACGGGAT
CGGGTAAATCAACGACTCTGGCCGCGATGATCAACCACCGTAATGAAAATCACAGAGGGCATATTTTAACAATAGAGGAT
CCTATTGAATATATACATCAACATAAAAAATCAATAGTTGATCAACGAGAGATAGGCATTGATACTCTAAGCTATGACAA
TGCATTGAAAAACGCAATGAGAGAAGCACCTGATGTGATATTAATTGGTGAAATTCGTGATCTTAACTCAATGAAACATG
CGATAGCTTATGCTGAAACAGGACATTTGTGCATTTCTACTTTGCATGCCAATAACGCCAATCAGGCTCTGGATAGAGTG
ATTAATTTTTTCCCCGATGAGGCAAGACAACAGATATTATTAGATTTATCTCTTAATTTAAAAGCAATCATTTCATTACG
TTTGATACCAGGAGTTGATAATCAACGTGTCGCAGCGGTGGAGATCTTGATTAACTCTCCTTACATTTCCGATTTGATTG
AAAAAGGGAAGATAGACGATATTAAAGAAGTCATGGCAAGAAGCACGGAACAAGGCATGCAGACTTTCGATCAGGCTTTA
TTTAATTTATATAAAGAAGGAAAAATTACCAAAGAAAATGCGATTAAGTATGCTGATTCAAAAAACAATGTGGGTTTACA
AATTCGATTGGGCGAAGAAAAAAATTTTAATATTCAAGATGAGAATTTACAAATACAACCCGATGATATTGATAAGTTTT
AA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
55.056 |
95.442 |
0.525 |
| pilU | Acinetobacter baylyi ADP1 |
52.941 |
95.71 |
0.507 |
| pilU | Vibrio cholerae strain A1552 |
48.286 |
93.834 |
0.453 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.428 |
90.885 |
0.413 |
| pilT | Legionella pneumophila strain ERS1305867 |
43.567 |
91.689 |
0.399 |
| pilT | Legionella pneumophila strain Lp02 |
43.567 |
91.689 |
0.399 |
| pilT | Neisseria meningitidis 8013 |
42.651 |
93.029 |
0.397 |
| pilT | Neisseria gonorrhoeae MS11 |
42.651 |
93.029 |
0.397 |
| pilT | Pseudomonas aeruginosa PAK |
42.857 |
91.957 |
0.394 |
| pilT | Pseudomonas stutzeri DSM 10701 |
42.274 |
91.957 |
0.389 |
| pilT | Acinetobacter baumannii strain A118 |
43.413 |
89.544 |
0.389 |
| pilT | Acinetobacter nosocomialis M2 |
43.413 |
89.544 |
0.389 |
| pilT | Acinetobacter baumannii D1279779 |
43.413 |
89.544 |
0.389 |
| pilT | Acinetobacter baylyi ADP1 |
41.176 |
91.153 |
0.375 |
| pilT | Vibrio cholerae strain A1552 |
41.945 |
88.204 |
0.37 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.945 |
88.204 |
0.37 |